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Results 1141 to 1170 of 4099:

Soil quality assessment using SAS (Soil Assessment System)Original Paper

Daniel Toth, Jaroslava Jankù, Adéla Marie Marhoul, Josef Kozák, Mansoor Maitah, Jan Jehlièka, Luká¹ Øeháèek, Richard Pøikryl, Tomá¹ Herza, Jan Vopravil, David Kincl, Tomá¹ Khel

Soil & Water Res., 2023, 18(1):1-15 | DOI: 10.17221/141/2022-SWR

The paper proposes a new soil evaluation system using the principle of the Saaty method. The Saaty method has been modified and named Soil Assessment System (SAS). Significance weights are assigned to individual soil characteristics (indicators). This provides a more detailed differentiation of the significance of the indicator on soil quality and a more accurate assessment, especially in marginal cases where the assessment by the methods used so far has not been fully conclusive. In addition to physico-chemical properties, other criteria are taken into account to assess not only productional but also non-productional functions. The possibility of using indicators referring to a broader context (e.g., soil sealing value) is also important, thus enabling a comprehensive assessment of the quality of the land. This results in points for individual sampling locations. Soils are categorized according to the number of points and results are shown on maps.


The increasing drought sensitivity of silver fir (Abies alba Mill.) is evident in the last two decadesOriginal Paper

Monika Vejpustková, Tomá¹ Èihák, Petr Fi¹er

J. For. Sci., 2023, 69(2):67-79 | DOI: 10.17221/172/2022-JFS



Silver fir (Abies alba Mill.) is still counted among drought-tolerant tree species. However, its ability to cope with the recent extremely dry period has not yet been sufficiently studied. The objective of research was to analyse differences in the climate-growth response between silver fir, Norway spruce (Picea abies L. Karst.) and European larch (Larix decidua Mill.) growing in areas with large-scale disintegration of spruce stands. In 2019–2021, the increment cores were sampled at 16 sites along the altitudinal gradient of 340–775 m a.s.l. in different regions of the Czech Republic affected by bark beetle outbreak. The radial growth pattern of fir was compared with that of spruce or larch growing under the same site conditions. In fir, the missing rings were frequently recorded during the period of peak SO2 pollution load in 1966–1985, but they were rarely identified in recent years. In spruce and larch, missing rings were less common and occurred mainly in the recent dry period after 2015. Fir was less sensitive to summer drought compared to larch and especially to spruce, which showed high sensitivity to summer drought regardless of the altitude. The significant positive response of fir to summer precipitation was recorded at sites up to 450 m a.s.l., however, its sensitivity to drought has increased in the last two decades. Hence, when considering the wider use of fir, it is necessary to respect its ecological requirements as much as possible in order to preserve its vitality and production potential in changing climatic conditions.

Assessment of the impact of agricultural support on crop diversityOriginal Paper

Zdeòka ®áková Kroupová, Luká¹ Èechura, Matìj Opatrný, Zuzana Hlou¹ková, Iveta Mlezivová

Agric. Econ. - Czech, 2023, 69(3):89-100 | DOI: 10.17221/387/2022-AGRICECON


This study examines the impact of agricultural support on crop diversity measured by a diversity index. Our results indicate that agricultural subsidies have a limited effect on agricultural biodiversity. By using unique farm-level data, we show that subsidies support the income of farmers rather than the agricultural biodiversity. The results are robust regarding the size, practice management and altitude of the agricultural holdings' operations and various measures of agricultural biodiversity. However, when interpreting the results, the limitations of biodiversity indices should be considered.

The varying promotion effects of fulvic acid with different molecular weights on the enhancement of grain yield and quality of winter wheatOriginal Paper

Yuanyuan Liang, Zeping Wang, Qiuzhe Shi, Fang Li, Zunkang Zhao, Yanlai Han, Yi Wang

Plant Soil Environ., 2023, 69(4):141-151 | DOI: 10.17221/391/2022-PSE

This study aims to verify the application effect of Fluvic acid (FA) with different molecular weights (MW) on the growth and quality of winter wheat. FA extracted from lignite was divided into 3 MWs (W1≤3000 D, 3000 D<W2≤10000 D, and W3>10000 D) by dialysis, and its structure was analyzed. Three application rates were set for each MW FA in the pot experiment, which were 10, 25 and 50 mg/kg in soil, respectively, and water was the control. There were significant interactive effects of MW and application rates of FAs. Compared with the control, all the FA treatments significantly increased grain yields, nitrogen uptake efficiencies, grain iron concentration, and soil available nitrogen concentration. Heatmap analysis revealed that the W1C2 (10 mg/kg W1) treatment had the most significant impacts for all analyzed indexes, whereas W3C3 (50 mg/kg W3) showed the weakest impacts. The results showed that at a low application rate (10 mg/kg in soil), the promotion effects of the three MW FAs were similar. W1 showed the most significant promotion effects, which was attributed to the combined effects of its lower MW and functional group characteristics.

Distribution of genetic variability in mature and progeny populations of Abies alba Mill. from the Polish Western and Eastern CarpathiansOriginal Paper

Marcin Zarek, Marta Kempf

J. For. Sci., 2023, 69(4):144-157 | DOI: 10.17221/11/2023-JFS


This study aimed to compare patterns in the genetic structure of 27 mature stands and the natural regeneration of A. alba in the Eastern and Western Carpathians within the introgression zone of two refugial lineages from the Apennine and Balkan peninsulas. The distribution of the genetic diversity of fir stands was analysed using paternally inherited chloroplast DNA and five nuclear dominant inter simple sequence repeat markers (ISSRs). The study showed that the Balkan haplotype prevailed in both parental and progeny populations, and this haplotype was found in many mature Eastern Carpathian stands. Relatively high levels of genetic diversity were found in the mature stands (effective number of alleles Ne = 1.517, Shannon index I = 0.436, expected heterozygosity He = 0.295) and progeny (Ne = 1.515, I = 0.436 and He = 0.294) of silver fir. The analysis of molecular variance (AMOVA) revealed slight differences among the mature fir stands from the Western and Eastern Carpathians, with a value of 1.1%. According to principal coordinates analysis (PCoA) and STRUCTURE analyses, the populations, including stands of mature and progeny trees, were genetically separated into two groups. Slight genetic differences between the mature and progeny populations in the Polish Carpathians indicate sound gene pool transmission, which is essential for creating new selection and breeding programmes.

Stem water potential, stomatal conductance and yield in irrigated apple treesOriginal Paper

Lenka Plavcová, Radek Jupa, Martin Mészáros, Klára Scháòková, Zuzana Kovalíková, Jan Námìstek

Plant Soil Environ., 2023, 69(7):303-313 | DOI: 10.17221/160/2023-PSE


Plant-based indicators of water status, such as midday stem water potential (Ψstem) and leaf stomatal conductance (gs), are used to optimise irrigation scheduling in horticultural crops because they integrate the effect of soil and climatic conditions and the internal physiological constraints. The use of these indicators relies on experimentally acquired thresholds that relate the value of the indicator to negative effects on yield. In five irrigation treatments, we monitored yield, fruit size and the courses of Ψstem and gs throughout four consecutive growing seasons. We found that Ψstem was more sensitive to irrigation treatment than gs. Both indicators increased with available soil water content (ASWC) and decreased with evaporative demands of the atmosphere (ETC). On a seasonal basis, crop load had a stronger impact on gs than Ψstem. In summary, our study explored the effect of environmental conditions and crop load on plant-based indicators of tree water status and can be useful for establishing thresholds for irrigation scheduling in apple tree orchards.

A preliminary study on the root-knot nematode resistance of a cherry plum cultivar Mirabolano 29COriginal Paper

Jia Liu, Jin Zhu, Hongwen Li, Deyong Luo, Jialian Xie, Huajia Li, Shuo Liu, Yuping Zhang, Lijuan Chen, Xiaodou Xie, Dong Wang, Ke Li, Meiying Yao, Guowei Zhang

Czech J. Genet. Plant Breed., 2023, 59(3):133-140 | DOI: 10.17221/111/2022-CJGPB

Grafting is the most important means of breeding peach, plum, apricot, and other fruit trees, and the selection of the rootstock is crucial to the quality of the grafting and the yield of the products. The traditional commonly used peach rootstock is susceptible to root-knot nematode infections, resulting in a decreased yield, while a variety of cherry plum rootstocks, Mirabolano 29C, is resistant to root-knot nematode. In this study, root-knot nematode infection experiments on seedlings of traditional peach rootstocks and Mirabolano 29C confirmed that Mirabolano 29C was indeed more resistant to root-knot nematodes. At the same time, we compared the roots of the root-knot nematode uninfected and infected Mirabolano 29C by transcriptome sequencing and found 3 176 differentially expressed genes. A further functional enrichment analysis of these genes found that the secondary metabolites, phenylpropane and flavonoids, may be responsible for the high resistance of Mirabolano 29C to root-knot nematodes. These results can provide a reference value for the disease resistance breeding of rootstocks.

Development of microclimate in the New Holland T6.165 tractorOriginal Paper

Jan Hart, Veronika Hartová

Res. Agr. Eng., 2023, 69(4):206-210 | DOI: 10.17221/27/2023-RAE

A number of stimuli lead to what is termed "seasonal fatigue", where the only firm interconnection is the fact that this form of fatigue only occurs during a certain period of the season. The interior of the cabin and its effect on the machine operator is notable. The microclimate of the environment in which the operator works has a direct impact on his/her condition and, consequentially, the extent of his/her fatigue. The development of microclimate in a modern agricultural machine must be identified, and based on such findings, recommendation should be given regarding procedures for improving the current situation in agricultural technology. For testing, the New Holland T6.165 tractor was therefore selected. The individual measurements show that a certain drop of oxygen occurs in the cabin during the first half hour of driving. This leads to  an increase in CO2, which is in turn caused by the higher ventilation of the given individuals present in the vehicle. To eliminate said drops in O2, the use of oxygen concentrators may be recommended.

Sensitivity of Listeria innocua to high hydrostatic pressure at low temperature in Ringer's solution and milkOriginal Paper

Osman Erkmen

Czech J. Food Sci., 2023, 41(3):189-195 | DOI: 10.17221/121/2022-CJFS


The research was performed to investigate the effect of high hydrostatic pressure low temperature (HHPLT) on Listeria innocua in Ringer's solution (RS) and raw milk (RM). The physicochemical properties of RM were studied at 300 MPa and 10 °C. Compared with the control, protein and lipase activities were reduced at HHPLT in RM. The L-values (luminance) of LHPLT applied RM were significantly (< 0.05) decreased for colour Pressure application at 300 MPa for 90 min totally inactivated L. innocua at –20 °C in both RS and RM. L. innocua showed resistance to low pressure (200 MPa) in RM. Overall, increasing the pressure with applications at –20 and –30 °C resulted in a higher (< 0.05) inactivation of L. innocua than at 10 and 20 °C. HHPLT applications to frozen RM resulted in the retention of textural characteristics.

Clinical infection of Brucella canis in a companion dog with discospondylitis in the Republic of KoreaCase Report

JH Seo, YI Oh, SH Kim, KW Seo, BJ Kang

Vet Med - Czech, 2023, 68(7):293-298 | DOI: 10.17221/37/2023-VETMED

A 2-year-old, spayed female, Bichon Frise dog was presented with reluctance to exercise, back pain, and frequent sitting down. Multiple osteolysis, periosteal proliferation, and sclerosis of the vertebral endplates of T11–13 were observed in the radiography, computed tomography, and magnetic resonance imaging. The bacterial culture of the urine specimen, the polymerase chain reaction (PCR) of the blood, and the antibody tests were positive for Brucella canis. Accordingly, discospondylitis caused by B. canis was diagnosed and doxycycline was administered. The clinical signs resolved and the culture and PCR results were negative afterwards. Doxycycline was discontinued after 6 months. The clinical signs recurred 2 weeks later, and the combination treatment of doxycycline and enrofloxacin was initiated. Though no clinical signs were observed after 9 months and the bacterial cultures and PCR were negative, the antibody titre remained at 1 :  200 or more. The dog will continue taking antibiotics until the antibody titre drops. To the best of our knowledge, this is the first case report of a clinical infection of B. canis associated with canine discospondylitis in the Republic of Korea. Although the clinical signs of brucellosis might improve with antibiotic treatment, the disease cannot be cured due to Brucella’s various strategies to evade host immune systems. Specifically, it can proliferate and replicate within the host cells, resulting in an environment that makes treatment less effective. Furthermore, owing to its zoonotic potential, owners and veterinarians should consider lifelong management or euthanasia.

A novel hybrid feature method for weeds identification in the agriculture sectorOriginal Paper

Sheeraz Arif Arif, Rashid Hussain, Nadia Mustaqim Ansari, Waseem Rauf

Res. Agr. Eng., 2023, 69(3):132-142 | DOI: 10.17221/77/2022-RAE

Weed identification and controlling systems are gaining great attention and are very effective for large productivity in the agriculture sector. Currently, farmers are facing a weed control and management problem, and to tackle this challenge precision agriculture in the form of selective spraying is much-needed practice. In this article, we introduce a novel framework for a weed identification system that leverages (hybrid) the robust and relevant features of deep learning models, such as convolutional neural network (CNN) and handcrafted features. First, we apply the image pre-processing and augmentation techniques for image quality and dataset size enhancement. Then, we apply handcrafted feature extraction techniques, such as local binary pattern (LBP) and histogram of oriented gradients (HOG) to extract texture and shape features from the input. We also apply the deep learning model, such as CNN, to capture the relevant semantic features. Lastly, we concatenate the features extracted from a different domain and explore the performance using different classifiers. We achieved better performance and classification accuracy in the presence of the extreme gradient boosting (XGBoost) classifier. The achieved results witnessed the effectiveness and applicability of the given method and the importance of concatenated features.

Assessment of old eutrophication in the sediments of Marchica Lagoon (a post-restored lagoon, Mediterranean): The role of geochemistry and granulometry of the sedimentsOriginal Paper

Abderrahmane Rahhou, Mostafa Layachi, Mustapha Akodad, Najib El Ouamari, Asmae Aknaf, Ali Skalli, Hamza Loukili, Youssef Bernichi, Brahim Oudra, Mourad Baghour

Soil & Water Res., 2023, 18(3):169-180 | DOI: 10.17221/142/2022-SWR

The aim of this study is to present the seasonal variation of organic matter (OM), total organic carbon (TOC), total nitrogen (TN), and total phosphorus (TP) in the bottom sediments of Marchica Lagoon, a post-restorated lagoon located in the Moroccan Mediterranean, and to estimate the potential role of the geochemistry and granulometry of bottom sediments in the retention of old eutrophication. The organic index of bottom sediment was found generally higher in old-eutrophic and enclosed areas. The surface sediments show variable levels of OM, TOC, TP, and TN; high in some cases (12.3%, 6.71%, 0.70%, and 0.30% respectively). These high levels were recorded in the central part of the lagoon and in areas subjected to high anthropogenic pressure, including wastewater discharges. Our results indicated that sediments are an excellent immobilizer of organic matter (C, N, and P), although, there was no correlation between sediment grain size and organic matter content. The absence of correlation might be explained by currentology and hydrodynamics, but also by the bathymetry of the lagoon. Therefore, sediments must be implicated in any lagoon restoration strategy and the site development plan.

Verification of a machine learning model for weed detection in maize (Zea mays) using infrared imagingOriginal Paper

Adam Hru¹ka, Pavel Hamouz

Plant Protect. Sci., 2023, 59(3):292-297 | DOI: 10.17221/131/2022-PPS

The potential of the framework of precision agriculture points towards the emergence of site-specific weed control. In light of the phenomena, the search for a cost-effective approach can help the discipline to accelerate the practical implementation. The paper presents a near-infrared data-driven machine learning model for real-time weed detection in wide-row cultivated maize (Zea mays) fields. The basis of the model is a dataset of 5 120 objects including 18 species of weeds significant in the context of wide-row crop production in the Czech Republic. The custom model was subsequently compared with a state-of-the-art machine learning tool You only look once (version 3). The custom model achieved 94.5 % identification accuracy while highlighting the practical limitations of the dataset.

Gallbladder atrophy associated with pancreatitis: Clinical and advanced imaging diagnosis in a dogCase Report

D Han, DI Jung

Vet Med - Czech, 2023, 68(11):435-442 | DOI: 10.17221/76/2023-VETMED

Gallbladder atrophy (GBA) is characterised by a reduction in the size and volume of the gallbladder. In human medicine, it is well-established that GBA frequently occurs together with pathologies affecting the gallbladder and pancreas. However, to the best of our knowledge, there is currently a dearth of reported cases of GBA in dogs within the veterinary field. In this study, we present a case report of GBA in a 7-year-old Yorkshire Terrier. The diagnosis of GBA was confirmed using abdominal ultrasonography and advanced imaging techniques, including computed tomography, which were performed over a 4-year period. The patient initially presented with predominantly gastrointestinal symptoms, which were subsequently diagnosed and treated as pancreatitis. Concurrently, a gallbladder nodule and an anomalous structure suspected to be cholelithiasis were identified. However, during the 4-year follow-up, the gallbladder structure regressed, leaving only the presence of the gallbladder nodule. Notably, cholecystectomy was not performed, and apart from pancreatitis-related symptoms, the patient did not show any gallbladder-related problems throughout the spontaneous atrophic process. Based on these findings, we propose that the observed GBA was likely induced by cholecystitis associated with pancreatitis. This case underscores the significance of considering GBA as a potential diagnosis in canine patients presenting with pancreatitis and gastrointestinal symptoms. Furthermore, it highlights the value of comprehensive diagnostic imaging in accurately determining the underlying cause of these symptoms.

Improving the nutritional quality of cereals and legumes by germinationOriginal Paper

Ayºe Seda ªenlik, Derya Alkan*

Czech J. Food Sci., 2023, 41(5):348-357 | DOI: 10.17221/44/2023-CJFS

Cereal and legume grains are germinated to improve their nutritional and sensory qualities. This study investigated the effect of germination on the physicochemical properties of some grains and legumes grown in Türkiye. At the end of the germination for 48 h and 96 h at 24 ± 1 °C, carbohydrate, protein, lipid, dietary fibre, dry matter, ash, total phenolic content, antioxidant capacity and colour analyses of the germinated grains were determined. The results indicated that the germination process increased the phenolic content of all samples. The legume seeds' 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging activity significantly increased with germination. The germination process significantly decreased the total carbohydrate contents of the samples. A statistically significant decrease was found for the protein content of barley and corn, especially by 48 h of germination. The lipid content of cereal grains decreased as germination progressed. It might be recommended to improve the functional properties of cereals and legumes by germination and their use in the food industry.

Development of Douglas fir merchantable stem volume model in the conditions of the Czech RepublicOriginal Paper

Radoslav Hlavica, Zdenìk Adamec

J. For. Sci., 2023, 69(12):515-524 | DOI: 10.17221/92/2023-JFS

A precise merchantable stem volume model of Douglas fir [Pseudotsuga menziesii (Mirb.) Franco] is missing in the Czech Republic. The aim of this study was to fit a new model through the reparametrization of volume equations (used in the Czech Republic or in other countries). We tested four volume equations (two from the Czech Republic, one from France and one from British Columbia) in the form of a nonlinear least squares model (NLS), weighted least squares model (WLS), and nonlinear mixed effects model (NLME). In all the tested models, the diameter at breast height of a tree and the total height of a tree were used as independent variables. Models were fitted on a dataset of 185 felled sample trees from eleven research areas with ages between 19–113 years. We have found that the model according to Omule et al. (1987) fits the merchantable stem volume as the best in the version of WLS model. Median value of the relative error of the final model was only –0.53%, which is less than the errors of models which are still used in the Czech Republic today.

Endocrine disruptors in foods: Overlooked factors contributing to the prevalence of obesityReview

Wenli Wu, Yang Yang, Bee KangTan, Shaoling Lin, Yaping Chen, Jiamiao Hu

Czech J. Food Sci., 2023, 41(6):393-405 | DOI: 10.17221/80/2023-CJFS


Endocrine disruptors, also known as endocrine-disrupting chemicals, could mimic or interfere with the body's hormones. Indeed, naturally occurring endocrine disruptors have been widely identified in daily foods. Moreover, industrialisation has resulted in increasing synthetic endocrine disruptors being produced and used as food additives or in food package materials, which makes exposure to endocrine disruptors become more common. Although the safety of synthetic chemicals has been extensively evaluated before entering into the food industry, increasing evidence has also highlighted that long-lasting exposure might influence long-term metabolic outcomes and be associated with the prevalence of obesity. Therefore, this review summarised the sources, detection methods, obesogenic effects and possible mechanisms of endocrine disruptors commonly found in foods, as well as discussed possible underlying mechanisms by which endocrine disruptors contribute to the increased risk of obesity. In conclusion, the review may provide useful information for understanding the association between endocrine disruptors and obesity, which could provide a new angle of view for preventing obesity prevalence.

Molecular evaluation of selected mango genotypes grown in Egypt using SCoT and ISSR markersOriginal Paper

Ibrahim El-Shenawy Ghounim, Mohammed Raafat Mustafa, Ibrahim Hmmam

Hort. Sci. (Prague), 2022, 49(4):213-224 | DOI: 10.17221/112/2021-HORTSCI

The mango (Mangifera indica L.) is a common tropical and subtropical fruit and the second main fruit crop in Egypt. In this work, start codon targeted (SCoT) and inter simple sequence repeat (ISSR) markers were employed to study the genetic relationship among twenty-three mango genotypes grown under the El-Giza district conditions. These genotypes consist of four newly introduced cultivars, six new progenies and thirteen closely related mango cultivars which were included as cultivar references for the best definition. Based on the overall SCoT and ISSR data, a total of 52 bands were generated (18 for SCoT and 34 for ISSR) with a total polymorphic percentage equal to 53.84% (44.44% for SCoT and 58.82% for ISSR). Based on the whole set of SCoT and ISSR marker data, the genetic similarity coefficients ranged from 80 to 97% with a mean equal to 88.5% and the first two principal axes explained about 31% of the total genetic variation among the mango accessions. The SCoT and ISSR data revealed that the four newly introduced mango genotypes, namely 'Aya', 'Kasturi', 'Maya' and 'Omer', are novel genetic resources based on their genetic profiles, which can be used for future breeding programmes in Egypt.

Forest fire area detection using Sentinel-2 data: Case of the Beni Salah national forest ‒ AlgeriaOriginal Paper

Rabah Zennir, Boubaker Khallef

J. For. Sci., 2023, 69(1):33-40 | DOI: 10.17221/50/2022-JFS



Forest cover plays an important role in terms of biodiversity and the environment. The Beni Salah national forest in its part which is located in the Guelma province in the extreme northeast of Algeria is an illustrative example where forest fires represent the chronic phenomenon which weighs heavily on this forest. The present study comes after a forest fire that occurred in 2021, when 3 000 ha of this forest were ravaged by forest fires according to the conservation of forests of Guelma. The main objective of this research is to map the severity of burns and estimate the severely burned area using Sentinel-2 satellite images based on remote sensing indices such as Normalized Difference Vegetation Index (NDVI), Differenced Normalized Difference Vegetation Index (dNDVI), Normalized Burn Ratio (NBR), Differenced Normalized Burn Ratio (dNBR), Green Normalized Difference Vegetation Index (GNDVI), Differenced Green Normalized Difference Vegetation Index (dGNDVI), Burn Area Index (BAI) and Relativized Burn Ratio (RBR). The result obtained revealed that 28.23% of the study area represents a seriously burned area. The established burn severity map is a real decision-making tool, but it still has certain limitations.

Influence of the excavator hydraulic system efficiency on the productivityOriginal Paper

Michal Jùza, Petr Heømánek

Res. Agr. Eng., 2023, 69(1):18-27 | DOI: 10.17221/77/2021-RAE

This paper presents the experimental research of factors influencing the UDS 214 excavator efficiency. The hydraulic oil flow rate is measured in hydraulic circuits for controlling the moving of the bucket of the UDS 214 ex­cavator. From the measured values, the total power losses of the individual hydraulic circuits and their efficiencies are evaluated by calculations and measurements. Furthermore, the times of the excavator cycles during a soil excavation and loading of the transport vehicle were measured. From the measured operating cycle times of the excavator, the average value of the operating cycle time was evaluated and, from this average time, the theoretical performance and the operating performance of the given excavator in the given operational states were calculated. Then, at the end of the paper, the individual calculated power losses as well as the efficiencies of the hydraulic circuits for controlling the moves of the excavator are evaluated. According to the findings, the swing hydraulic circuit of the excavator, which has the second highest power loss of 5.926 kW and its percentage in the average tested cycle time of the excavator is 48%, seems to be a suitable hydraulic circuit for the innovation.

Presence of zoonotic black-pigmented periodontal pathogens in the oral microbiota of pet and stray catsOriginal Paper

V Ozavci, HTY Dolgun, S Kirkan

Vet Med - Czech, 2023, 68(2):62-68 | DOI: 10.17221/59/2022-VETMED

Black-pigmented bacteria are one of the neglected species to cause periodontal disease in cats, and they are also zoonotic agents that pose an infection risk to humans. In this study, we aimed to determine the presence of Porphyromonas gingivalis, Porphyromonas gulae and Prevotella nigrescens in the oral microbiota of pet and stray cats. Dental swab samples were taken from 25 pet cats and 25 stray cats with symptoms of periodontal disease and then investigated by multiplex polymerase chain reaction using 16S rRNA species-specific primers. As a result of the multiplex PCR analysis, P. gingivalis 3/25 (12%), P. nigrescens 1/25 (4%), P. gingivalis + P. gulae 7/25 (28%), P. gingivalis + P. nigrescens 1/25 (4%), P. gulae + P. nigrescens 1/25 (4%), and P. gingivalis + P. gulae + P. nigrescens 2/25 (8%) were molecularly typed in the pet cats. In addition, 1/25 (4%) of P. gulae and 21/25 (84%) of P. gingivalis + P. gulae were typed in the stray cats. In 10/25 (40%) pet and 3/25 (12%) stray cat samples, no bacteria were detected by molecular typing. In summary, the results provide strong evidence that black-pigmented zoonotic pathogens are associated with cat periodontal disease.

Delineation of inbred lines of Indian mustard into diverse gene pools based on agro-morphological traitsOriginal Paper

Kunwar Harendra Singh, Guman Singh, Lal Singh, Nashra Aftab, Ajay K. Thakur

Czech J. Genet. Plant Breed., 2023, 59(2):109-116 | DOI: 10.17221/75/2022-CJGPB

The present study was conducted to explore the variability generated through recombination breeding for nine economically important traits in Indian mustard (Brassica juncea L. Czern & Coss.). Delineation of the inbred lines to different gene pools, based on genetic diversity, enables their utilisation in hybrid breeding. The unweighted pair group method with arithmetic mean (UPGMA) and a Euclidean distance matrix was used to delineate the inbred lines to clusters. The variability was studied using the range and coefficients of variation of the traits. Significant variability was observed for all studied traits except for oil content and days to maturity. 128 Indian mustard genotypes were grouped into four distinct gene pools based on genetic diversity. A set of 20 most diverse genotype combinations was produced. Promising inbred lines were identified and recommended as donors for the respective trait. The pedigree analysis of the inbred line groups revealed, that recombination breeding caused a large diversity as confirmed by the assignment of inbred lines with the same parentage to specific clusters.

Elevated CO2 mitigates the effects of cadmium stress on vegetable growth and antioxidant systemsOriginal Paper

Xiao Wang, Deyan Li, Xiaohui Song

Plant Soil Environ., 2023, 69(5):202-209 | DOI: 10.17221/125/2023-PSE

Previous studies of the effects of elevated CO2 (eCO2) concentrations and heavy metal stress conditions on plant growth and physiology have mostly focused on crops rather than vegetables. In this study, we investigated the effects of Cd stress on the growth and antioxidant system of pak choi (Brassica rapa L.), water spinach (Ipomoea aquatica Forssk.), cherry radish (Raphanus raphanistrum subsp. sativus (L.) Domin) and pepper (Capsicum annuum L.) growing in pots under ambient CO2 (aCO2) or eCO2 conditions. In general, Cd stress reduced plant biomass and SPAD values under aCO2 and eCO2 conditions; however, the reduction was smaller under eCO2. Cd stress significantly reduced vegetable superoxide dismutase (SOD) and catalase (CAT) activities under both aCO2 and eCO2 conditions; however, the decrease in cherry radish and pepper peroxidase and SOD activities and in pak choi SOD and CAT activities was significantly less under eCO2. The Cd content of the edible parts of pak choi, water spinach and pepper was significantly lower under eCO2 than under aCO2. Our data suggest that eCO2 concentrations could be beneficial for the growth of some vegetables and reduce the Cd content.

Biodegradation of chlorpyrifos by soil bacteria and their effects on growth of rice seedlings under pesticide-contaminated soilOriginal Paper

Thanakorn Saengsanga, Nutthida Phakratok

Plant Soil Environ., 2023, 69(5):210-220 | DOI: 10.17221/106/2023-PSE

This study identified three soil bacteria (NRRU-BW3, NRRU-BW3, and NRRU-TV11) that degrade chlorpyrifos, produce indole-3-acetic acid, and exopolysaccharides under pesticide stress. The results revealed that soil bacteria were identified as Priestia megaterium NRRU-BW3, Bacillus siamensis NRRU-BW9, and Bacillus amyloliquefaciens NRRU-TV11. These strains showed the ability to produce indole-3-acetic acid (IAA) and exopolysaccharides (EPS) in chlorpyrifos. Moreover, these bacteria can degrade chlorpyrifos (CP) in an aqueous medium, and a 33–52% degradation rate was observed after 14 days of incubation. Inoculation with the NRRU-TV11 significantly increased (P < 0.05) plant height, root length, biomass and vigour index of rice seedlings compared to uninoculated controls in chlorpyrifos-contaminated soil. The findings demonstrated the beneficial effects of indigenous NRRU-TV11 on rice seedling development and chlorpyrifos degradation and recommended this strain as a potential replacement for plant growth improvement and environmental bioremediation of pesticide-contaminated agricultural soils.

Beta-lactam, aminoglycoside, and quinolone resistance in Escherichia coli strains isolated from shrimps and mussels in the Marmara SeaOriginal Paper

B Celik, B Ergul, AI Kekec, B Halac, B Maslak, B Diren Sigirci, B Basaran Kahraman, AF Bagcigil, K Metiner, S Ak (email:

Vet Med - Czech, 2023, 68(5):208-217 | DOI: 10.17221/105/2022-VETMED

The purpose of the study was to examine the prevalence of Escherichia coli in shrimps and mussels, and to determine the distribution of β-lactam, aminoglycoside, quinolone, and multi-drug resistance phenotypically and genotypically in E. coli isolates obtained from mussels and shrimps in Istanbul. Faecal samples were collected from mussels (n = 96) and shrimps (n = 96) from the Marmara Sea coastline and fish markets in Istanbul. For the detection of antibiotic susceptibilities, seven antibiotic groups were used. β-lactamase, aminoglycoside, and quinolone genes were also determined. A total of 34 (17.7%, 15 shrimps, and 19 mussels) E. coli were isolated, and 17 (50%) were found to be resistant to one or more antimicrobials. The highest resistance was seen against aminoglycosides with 11 isolates (32.35%), followed by quinolones with 10 isolates (29.41%) and extended-spectrum β-lactamase (ESBL) with 4 isolates (11.76%). Multi-drug resistance was detected in 5 isolates (14.7%) from 3 shrimp and 2 mussel samples. The prevalence of ESBL genes was demonstrated at 3.84% in mussels and shrimp samples. There were no AmpC and carbapenemase-producing genes. These samples harbored blaCTX-M-1 (n = 3) and blaTEM (n = 4). Ten isolates were resistant to aminoglycosides genotypically. Resistance genes detected were strB in 2 isolates, aadA in 5, strB and aadA together in 3, ANT('')-Ia, aphA1 and aphA2 simultaneously in 3, aphA1 in 1, aac(3)-IIa in 1 isolate. aac(6')-Ib-cr gene was detected in only one of 10 phenotypically resistant isolates to quinolones.

Improving the stability of soil aggregates using soil additives and revegetation by grasslandOriginal Paper

Markéta Mayerová, Tomá¹ ©imon, Martin Stehlík, Mikulá¹ Madaras

Plant Soil Environ., 2023, 69(6):282-290 | DOI: 10.17221/123/2023-PSE


Soil aggregate stability (SAS) is an important factor for soil quality and fertility. There are limited possibilities to influence this soil property, but one investigated method is the application of additives which have the potential to improve SAS. We established a four-year field experiment on a clay-loam Luvisol with poor soil structure to monitor SAS following the application of additives and grassland revegetation. Treatments included: (1) the untreated control; (2) compost; (3) biochar; (4) liming; (5) cattle manure; (6) woodchips; (7) woodchips + fungi inoculation; (8) pellets; (9) pellets + fungi; (10) hydrogel and (11) the change of arable land to grassland. The lowest 23.39% average SAS value was recorded for the untreated control, and then 23.92% for lime treatment, and the highest 27.69% average value was for hydrogel treatment, followed by woodchips with 27.22% and woodchips + fungi with 27.02%. A significant SAS increase of more than 200% was evident on the grassland two years after the trial’s establishment, and this was also associated with other improved physical and chemical soil properties. Finally, while most of our applied soil additives were relatively ineffective in agricultural practice, grassland revegetation is highly recommended for its rapid increase in soil aggregate stability.

Dietary supplementation of natural tannin relieved intestinal injury and oxidative stress in piglets challenged with enterotoxigenic Escherichia coliOriginal Paper

Qian Zhang, Lin Zhang, Linxiao Du, Yanyan Zhang, Dan Yi, Di Zhao, Binying Ding, Yongqing Hou, Tao Wu

Czech J. Anim. Sci., 2023, 68(7):296-305 | DOI: 10.17221/148/2022-CJAS

This study is to explore the effects of natural tannin (NBT) on intestinal injury in piglets challenged with enterotoxigenic Escherichia coli (ETEC). Thirty-two 7-day-old piglets were divided into four groups: I) control group, piglets were fed a basic diet without challenge; II) ETEC group, piglets were fed a basic diet and challenged with enterotoxigenic E. coli; III) NBT + ETEC group, piglets were fed a basic diet with supplementation of 2 g/kg NBT and challenged with enterotoxigenic E. coli; and IV) ZnO + ETEC group, piglets were fed a basic diet with supplementation of 3 g/kg ZnO and challenged with enterotoxigenic E. coli. Results showed that diarrhoea rate was significantly increased in ETEC group, whereas it was decreased after NBT supplementation (P < 0.05); NBT supplementation significantly increased the average daily gain of ETEC-infected piglets. ETEC group showed damaged intestinal morphology (as indicated by decreased villus height, surface area and increased crypt depth) and barrier function (as indicated by decreased d-xylose content and increased diamine oxidase activity), induced oxidative stress (as indicated by increased myeloperoxidase activity) while supplementation of NBT had an obvious impact on the recovery of intestinal function and alleviated the oxidative damage. Further analysis showed that NBT could decrease the expression of genes related to intestinal injury (matrix metalloproteinase-3), and specifically upregulate the expression of oxidative stress-related genes (nuclear factor erythroid 2-related factor 2 and hypoxia inducible factor-1). Overall, dietary supplementation of NBT relieved intestinal injury and oxidative stress in piglets challenged with ETEC. NBT could be an alternative to ZnO as a feed additive in piglet diet.

Impact of protection methods and abiotic factors on Nothofagus pumilio seedlings mortality in Torres del Paine National Park, ChileOriginal Paper

Martin Smola, Josef Cafourek, Antonín Kusbach, Martin ©enfeldr, Josef Støítecký, Petr Madìra

J. For. Sci., 2023, 69(9):389-400 | DOI: 10.17221/45/2023-JFS


National parks (NP) are the last refugia of forests dominated by the Nothofagus species in Chile. However, frequent, careless human-caused fires are destroying these forests even within the national parks. After large-scale fires, N. pumilio stands are unable to recover naturally neither in generative nor in vegetative ways and artificial regeneration must be resorted to in order to maintain their extent. However, even artificial regeneration is not successful without protection against browsing. Therefore, the aim of this study was to experimentally test a range of repellents and other methods of mechanical protection of seedlings against browsing. Five replicates of plots were placed in Torres del Paine NP, in different habitat conditions and with different methods of protection against browsing (11 repellents, wire mesh, plastic tube and control). In each plot, 12 seedlings were treated with each type of protection. In our experiment, only 8% of the seedlings were damaged by browsing, while the mortality rate was 38%. The results indicate a more significant effect of abiotic factors (mainly frost, drought or wind) on seedling mortality than browsing. In parallel, however, it is clear that, compared with the control, six of the eleven repellents used in the experiment showed a significantly positive effect. We suggest the use of plastic tubes as the best option to protect seedlings, which, in addition to providing 100% protection against browsing, are likely to provide more favourable microclimatic conditions for seedlings, similar to leaving the burned snags.

Development of a novel invA gene-based real-time PCR assay for the detection of Salmonella in foodOriginal Paper

Marko Dmitric, Dejan Vidanovic, Kazimir Matovic, Bojana Tesovic, Milanko Sekler, Ivan Vicic, Nedjeljko Karabasil

Czech J. Food Sci., 2023, 41(4):287-294 | DOI: 10.17221/114/2022-CJFS


In this study, the primers and the probe were designed, and a completely new real-time polymerase chain reaction (PCR) protocol for detecting the invA gene of Salmonella in food was optimised and validated in-house. The inclusivity test used 76 different Salmonella isolates with no false-negative results. The exclusivity was tested using 45 non-Salmonella microorganisms with no false-positive results. The method was also successfully applied while examining five different artificially contaminated food categories. The results were compared to the standard method (ISO 6579-1) and two previously validated real-time PCR methods. The developed assay is sensitive and specific for rapidly detecting Salmonella in food.

Diversified germination strategies of Centaurea cyanus populations resistant to ALS inhibitorsOriginal Paper

Marta Stankiewicz-Kosyl, Ma³gorzata Haliniarz

Plant Protect. Sci., 2023, 59(4):379-388 | DOI: 10.17221/62/2023-PPS

Centaurea cyanus is an annual weed mostly infesting winter cereals and rape. The aim of the study was to provide insights into the association between the seed germination characteristics and the herbicide sensitivity in C. cyanus in the presence of the genetic background control. Four populations of this species resistant to acetolactate synthase (ALS) inhibitors were tested. A germination study was conducted in a growth cabinet. Plants were sprayed at the 2- to 3-leaf stage with a field dose of florasulam (5 g/ha). There were four herbicide treatments dates, which included plants that germinated up to the seventh day, between eight and 12, 13 and 15, 16 and 20 days of the germination study. The germination dynamics of the four tested populations of C. cyanus resistant to florasulam was diversified. Three of them reached their maximum germination on the fourth day after sowing, however, the germination of the fourth population was spread over time with the highest number of germinated seeds found seven and twelve days after sowing. The germination time of the plants belonging to the resistant C. cyanus populations differentiated their reaction to florasulam. The conducted study indicated that the germination biology of ALS inhibitor-resistant populations of C. cyanus is diverse, which makes it difficult to introduce universal management strategies of this species into agricultural practice. Integration of control methods is recommended, including delaying the crop sowing date.

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