Bercier P, Gottschalk M, Grenier D. Effects of Actinobacillus pleuropneumoniae on barrier function and inflammatory response of pig tracheal epithelial cells. Pathog Dis. 2019 Feb;77(1): 7 p.
https://doi.org/10.1093/femspd/fty079
Bernardet JF, Bowman JP. The genus flavobacterium. Prokaryotes. 2006;7:481-531.
Bin P, Tang Z, Liu S, Chen S, Xia Y, Liu J, Wu H, Zhu G. Intestinal microbiota mediates Enterotoxigenic Escherichia coli-induced diarrhea in piglets. BMC Vet Res. 2018 Dec 5;14(1): 13 p.
https://doi.org/10.1186/s12917-018-1704-9
Boutard M, Cerisy T, Nogue PY, Alberti A, Weissenbach J, Salanoubat M, Tolonen AC. Functional diversity of carbohydrate-active enzymes enabling a bacterium to ferment plant biomass. PLoS Genet. 2014 Nov 13;10(11): 12 p.
https://doi.org/10.1371/journal.pgen.1004773
Chen S, Wu X, Xia Y, Wang M, Liao S, Li F, Yin J, Ren W, Tan B, Yin Y. Effects of dietary gamma-aminobutyric acid supplementation on amino acid profile, intestinal immunity, and microbiota in ETEC-challenged piglets. Food Funct. 2020;11(10):9067-74.
https://doi.org/10.1039/D0FO01729A
Dou S, Gadonna-Widehem P, Rome V, Hamoudi D, Rhazi L, Lakhal L, Larcher T, Bahi-Jaber N, Pinon-Quintana A, Guyonvarch A, Huerou-Luron IL. Characterisation of early-life fecal microbiota in susceptible and healthy pigs to post-weaning diarrhoea. PLoS One. 2017 Jan 10;12(1): 20 p.
https://doi.org/10.1371/journal.pone.0169851
Flint HJ, Scott KP, Duncan SH, Louis P, Forano E. Microbial degradation of complex carbohydrates in the gut. Gut Microbes. 2012 Jul 14;3(4):289-306.
https://doi.org/10.4161/gmic.19897
Fu S, Zhuang F, Guo L, Qiu Y, Xiong J, Ye C, Liu Y, Wu Z, Hou Y, Hu CA. Effect of baicalin-aluminum complexes on fecal microbiome in piglets. Int J Mol Sci. 2019 May 14;20(10): 15 p.
https://doi.org/10.3390/ijms20102390
Harris K, Kassis A, Major G, Chou CJ. Is the gut microbiota a new factor contributing to obesity and its metabolic disorders? J Obes. 2012 Jan 24;2012: 14 p.
https://doi.org/10.1155/2012/879151
Heo JM, Opapeju FO, Pluske JR, Kim JC, Hampson DJ, Nyachoti CM. Gastrointestinal health and function in weaned pigs: A review of feeding strategies to control post-weaning diarrhoea without using in-feed antimicrobial compounds. J Anim Phys Anim Nutr. 2013 Apr;97(2):207-37.
https://doi.org/10.1111/j.1439-0396.2012.01284.x
Hill C, Guarner F, Reid G, Gibson GR, Merenstein DJ, Pot B, Morelli L, Canani RB, Flint HJ, Salminen S, Calder PC. The International Scientific Association for Probiotics and Prebiotics consensus statement on the scope and appropriate use of the term probiotic. Nat Rev Gastroenterol Hepatol. 2014 Jun 10;11(8):506-14.
https://doi.org/10.1038/nrgastro.2014.66
Hu YJ, Cowling BJ. Reducing antibiotic use in livestock, China. Bull World Health Organ. 2020 May 1;98(5):360-1.
https://doi.org/10.2471/BLT.19.243501
Huang MZ, Wang SY, Wang H, Cui DA, Yang YJ, Liu XW, Kong XJ, Li JY. Differences in the intestinal microbiota between uninfected piglets and piglets infected with porcine epidemic diarrhea virus. PLoS One. 2018 Feb 15;13(2): 13 p.
https://doi.org/10.1371/journal.pone.0192992
Langille MGI. Exploring linkages between taxonomic and functional profiles of the human microbiome. mSystems. 2018 Mar 27;3(2): 4 p.
https://doi.org/10.1128/mSystems.00163-17
Leser TD, Molbak L. Better living through microbial action: The benefits of the mammalian gastrointestinal microbiota on the host. Environ Microbiol. 2009 Sep;11(9):2194-206.
https://doi.org/10.1111/j.1462-2920.2009.01941.x
Ley RE, Turnbaugh PJ, Klein S, Gordon JI. Human gut microbes associated with obesity. Nature. 2006 Dec;444(7122):1022-3.
https://doi.org/10.1038/4441022a
Lv LX, Fang DQ, Shi D, Chen DY, Yan R, Zhu YX, Chen YF, Shao L, Guo FF, Wu WR, Li A. Alterations and correlations of the gut microbiome, metabolism and immunity in patients with primary biliary cirrhosis. Environ Microbiol. 2016 Jul;18(7):2272-86.
https://doi.org/10.1111/1462-2920.13401
Lv Y, Li X, Zhang L, Shi Y, Du L, Ding B, Hou Y, Gong J, Wu T. Injury and mechanism of recombinant E. coli expressing STa on piglets colon. J Vet Med Sci. 2018;80(2):205-12.
https://doi.org/10.1292/jvms.17-0528
Lyu Y, Debevere S, Bourgeois H, Ran M, Broeckx BJ, Vanhaecke L, Hesta M. Dose-dependent effects of dietary xylooligosaccharides supplementation on microbiota, fermentation and metabolism in healthy adult cats. Molecules. 2020a Oct 29;25(21): 14 p.
https://doi.org/10.3390/molecules25215030
Lyu Y, Su C, Verbrugghe A, Van de Wiele T, Martinez-Caja AM, Hesta M. Past, present, and future of gastrointestinal microbiota research in cats. Front Microbiol. 2020b Jul 24;11: 15 p.
https://doi.org/10.3389/fmicb.2020.01661
Mon KK, Saelao P, Halstead MM, Chanthavixay G, Chang HC, Garas L, Maga EA, Zhou H. Salmonella enterica serovars Enteritidis infection alters the indigenous microbiota diversity in young layer chicks. Front Vet Sci. 2015 Nov 23;2: 16 p.
https://doi.org/10.3389/fvets.2015.00061
Mondot S, de Wouters T, Dore J, Lepage P. The human gut microbiome and its dysfunctions. Dig Dis. 2013;31(3-4):278-85.
https://doi.org/10.1159/000354678
Mosca A, Leclerc M, Hugot JP. Gut microbiota diversity and human diseases: Should we reintroduce key predators in our ecosystem? Front Microbiol. 2016 Mar 31;7: 12 p.
https://doi.org/10.3389/fmicb.2016.00455
Nagy B, Fekete PZ. Enterotoxigenic Escherichia coli in veterinary medicine. Int J Med Microbiol. 2005 Oct 5;295(6-7):443-54.
https://doi.org/10.1016/j.ijmm.2005.07.003
Ni Y, Yang X, Zheng L, Wang Z, Wu L, Jiang J, Yang T, Ma L, Fu Z. Lactobacillus and Bifidobacterium improves physiological function and cognitive ability in aged mice by the regulation of gut microbiota. Mol Nutr Food Res. 2019 Aug 21;63(22).
https://doi.org/10.1002/mnfr.201900603
Park S, Ji Y, Jung HY, Park H, Kang J, Choi SH, Shin H, Hyun CK, Kim KT, Holzapfel WH. Lactobacillus plantarum HAC01 regulates gut microbiota and adipose tissue accumulation in a diet-induced obesity murine model. Appl Microbiol Biotechnol. 2017 Feb 1;101(4):1605-14.
https://doi.org/10.1007/s00253-016-7953-2
Pop M, Walker AW, Paulson J, Lindsay B, Antonio M, Hossain MA, Oundo J, Tamboura B, Mai V, Astrovskaya I, Bravo HC. Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition. Genome Biol. 2014 Jun 27;15(6): 12 p.
https://doi.org/10.1186/gb-2014-15-6-r76
Pop M, Paulson JN, Chakraborty S, Astrovskaya I, Lindsay BR, Li S, Bravo HC, Harro C, Parkhill J, Walker AW, Walker RI. Individual-specific changes in the human gut microbiota after challenge with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment. BMC Genom. 2016 Jun 8;17(1): 11 p.
https://doi.org/10.1186/s12864-016-2777-0
Rezasoltani S, Aghdaei HA, Dabiri H, Sepahi AA, Modarressi MH, Mojarad EN. The association between fecal microbiota and different types of colorectal polyp as precursors of colorectal cancer. Microb Pathog. 2018 Nov 1;124:244-9.
https://doi.org/10.1016/j.micpath.2018.08.035
Sheridan PO, Martin JC, Lawley TD, Browne HP, Harris HM, Bernalier-Donadille A, Duncan SH, O’Toole PW, Scott KP, Flint HJ. Polysaccharide utilization loci and nutritional specialization in a dominant group of butyrate-producing human colonic Firmicutes. Microb Genom. 2016 Feb;2(2): 16 p.
https://doi.org/10.1099/mgen.0.000043
Silva DR, Sardi JDCO, de Souza Pitangui N, Roque SM, da Silva ACB, Rosalen PL. Probiotics as an alternative antimicrobial therapy: Current reality and future directions. J Funct Foods. 2020 Oct 1;73: 12 p.
https://doi.org/10.1016/j.jff.2020.104080
Smith BJ, Miller RA, Schmidt TM. Muribaculaceae genomes assembled from metagenomes suggest genetic drivers of differential response to acarbose treatment in mice. BioRxiv. 2020 Jan 1: 28 p.
Sornplang P, Piyadeatsoontorn S. Probiotic isolates from unconventional sources: A review. J Anim Sci Technol. 2016 Dec;58(1): 11 p.
https://doi.org/10.1186/s40781-016-0108-2
Swidsinski A, Dorffel Y, Loening-Baucke V, Theissig F, Ruckert JC, Ismail MV, Rau WA, Gaschler D, Weizenegger M, Kuhn S, Schilling J. Acute appendicitis is characterised by local invasion with Fusobacterium nucleatum/necrophorum. Gut. 2011 Jan 1;60(1):34-40.
https://doi.org/10.1136/gut.2009.191320
Wang L, Zhou J, Hou Y, Yi D, Ding B, Xie J, Zhang Y, Chen H, Wu T, Zhao D, Hu CA. N-Acetylcysteine supplementation alleviates intestinal injury in piglets infected by porcine epidemic diarrhea virus. Amino Acids. 2017 Mar 3;49(12):1931-43.
https://doi.org/10.1007/s00726-017-2397-2
Wang J, Zhu G, Sun C, Xiong K, Yao T, Su Y, Fang H. TAK-242 ameliorates DSS-induced colitis by regulating the gut microbiota and the JAK2/STAT3 signaling pathway. Microb Cell Factories. 2020 Aug 6;19(1): 17 p.
https://doi.org/10.1186/s12934-020-01417-x
Wu T, Lv Y, Li X, Zhao D, Yi D, Wang L, Ding B, Chen H, Hou Y. Establishment of a recombinant Escherichia coli-induced piglet diarrhea model. J Anim Sci. 2018a Dec 7;96(Suppl 3):1517-34.
https://doi.org/10.1093/jas/sky404.078
Wu T, Zhang Y, Lv Y, Li P, Yi D, Wang L, Zhao D, Chen H, Gong J, Hou Y. Beneficial impact and molecular mechanism of Bacillus coagulans on piglets’ intestine. Int J Mol Sci. 2018b Jul 18;19(7): 17 p.
https://doi.org/10.3390/ijms19072084
Wu T, Lyu Y, Li X, Wu M, Yu K, Li S, Ji C, Zhang Q, Zhang Y, Zhao D, Yi D. Impact of N-acetylcysteine on the gut microbiota in the piglets infected with porcine epidemic diarrhea virus. Front Vet Sci. 2021a Jan 12;7: 10 p.
https://doi.org/10.3389/fvets.2020.582338
Wu T, Shi Y, Zhang Y, Zhang M, Zhang L, Ma Z, Zhao D, Wang L, Yu H, Hou Y, Gong J. Lactobacillus rhamnosus LB1 alleviates Enterotoxigenic Escherichia coli-induced adverse effects in piglets by improving host immune response and anti-oxidation stress and restoring intestinal integrity. Front Cell Infect Microbiol. 2021b Nov 2;11: 13 p.
https://doi.org/10.3389/fcimb.2021.724401
Xu X, Pan Y, Xu B, Yan Y, Yin B, Wang Y, Hu S, Ma L. Effects of Cortex phellodendri extract on post-weaning piglets diarrhoea. Vet Med Sci. 2020 Jun 25;6(4):901-9.
https://doi.org/10.1002/vms3.304
Yan F, Li N, Shi J, Li H, Yue Y, Jiao W, Wang N, Song Y, Huo G, Li B. Lactobacillus acidophilus alleviates type 2 diabetes by regulating hepatic glucose, lipid metabolism and gut microbiota in mice. Food Funct. 2019;10(9):5804-15.
https://doi.org/10.1039/C9FO01062A
Zhao Y, Wang J, Wang H, Huang Y, Qi M, Liao S, Bin P, Y. Effects of GABA supplementation on intestinal SIgA secretion and gut microbiota in the healthy and ETEC-infected weanling piglets. Mediat Inflamm. 2020 May 26;2020: 17 p.
https://doi.org/10.1155/2020/7368483