Agro-morphological and molecular diversity in castor (Ricinus communis L.) germplasm collected from Andaman and Nicobar Islands, India M., Anjani K., Usha Kiran B., Vivekananda K. (2015): Agro-morphological and molecular diversity in castor (Ricinus communis L.) germplasm collected from Andaman and Nicobar Islands, India. Czech J. Genet. Plant Breed., 51: 96-109.
download PDF
Castor (Ricinus communis L.) is an industrial oilseed crop grown worldwide. Its oil with more than 80% ricinoleic acid makes it a chief raw material for numerous industrial applications and biofuel production. Castor grows in a wild form across India including Andaman & Nicobar Islands, which are geographically quite isolated from mainland India. Thirty-three accessions growing in isolation in these Islands were used in the present study. Genetic diversity among these accessions was assessed using 18 agro-morphological traits and 29 EST-SSR markers. High agro-morphological and molecular variability was observed among these accessions. Both agro-morphological traits and EST-SSR markers effectively discriminated the accessions. However, EST-SSRs separated the accessions into more groups than did agro-morphological data, implying high efficiency and resolution of EST-SSR markers in genetic analysis of castor germplasm from Andaman & Nicobar. The diverse accessions identified in the present investigation would serve as genetically diverse sources in castor breeding programmes.
Allan Gerard, Williams Amber, Rabinowicz Pablo D., Chan Agnes P., Ravel Jacques, Keim Paul (2008): Worldwide genotyping of castor bean germplasm (Ricinus communis L.) using AFLPs and SSRs. Genetic Resources and Crop Evolution, 55, 365-378
Anderson J. A., Churchill G. A., Autrique J. E., Tanksley S. D., Sorrells M. E. (1993): Optimizing parental selection for genetic linkage maps. Genome, 36, 181-186
Anjani K. (2001a): Exploration of castor (Ricinus communis L.) germplasm in Andaman and Nicobar Islands. IPGRI Newsletter for Asia, the Pacific and Oceania, 34: 10.
Anjani K. (2001b): Catalogue of Castor (Ricinus communis L.) (1990–2000). Vol. 1. Hyderabad, Germaplasm Management Unit (Castor), Directorate of Oilseeds Research.
Anjani K. (2010): Extra-early maturing germplasm for utilization in castor improvement. Industrial Crops and Products, 31, 139-144
Anjani K. (2012): Castor genetic resources: A primary gene pool for exploitation. Industrial Crops and Products, 35, 1-14
Athma P., Vaidyanath K., Reddy T.P. (1982): Peroxidase isoenzyme studies in certain varieties of Ricinus communis L. Indian Journal of Botany, 5: 178–182.
Bajay Miklos Maximiliano, Pinheiro José Baldin, Batista Carlos Eduardo Araújo, Nobrega Márcia Barreto Medeiros, Zucchi Maria Imaculada (2009): Development and characterization of microsatellite markers for castor (Ricinus communis L.), an important oleaginous species for biodiesel production. Conservation Genetics Resources, 1, 237-239
Bajay M. M., Zucchi M. I., KIIhl T. A. M., Batista C. E. A., Monteiro M., Pinheiro J. B. (): Development of a novel set of microsatellite markers for Castor bean, Ricinus communis (Euphorbiaceae)1. American Journal of Botany, 98, e87-e89
Berman Paula, Nizri Shahar, Wiesman Zeev (2011): Castor oil biodiesel and its blends as alternative fuel. Biomass and Bioenergy, 35, 2861-2866
Birchler J. A. (2003): In Search of the Molecular Basis of Heterosis. THE PLANT CELL ONLINE, 15, 2236-2239
Brigham Raymond D. (1967): Natural Outcrossing in Dwarf-Internode Castor, Ricinus communis L.1. Crop Science, 7, 353-
Chan Agnes P, Crabtree Jonathan, Zhao Qi, Lorenzi Hernan, Orvis Joshua, Puiu Daniela, Melake-Berhan Admasu, Jones Kristine M, Redman Julia, Chen Grace, Cahoon Edgar B, Gedil Melaku, Stanke Mario, Haas Brian J, Wortman Jennifer R, Fraser-Liggett Claire M, Ravel Jacques, Rabinowicz Pablo D (): Draft genome sequence of the oilseed species Ricinus communis. Nature Biotechnology, 28, 951-956
Costa M.N., Pereira W.E., Bruno R.L.A, Freire E.C., Noberega M.B.M., Milani M., Oliveira A.P. (2006): Genetic divergence between castor bean accessions and cultivars through multivariate statistics. Pesquisa Agropecuária Brasileira, 41: 1617–1622.
Demirbas Ayhan (2007): Importance of biodiesel as transportation fuel. Energy Policy, 35, 4661-4670
Doyle J.J., Doyle J.L. (1990): Isolation of plant DNA from fresh tissue. Focus, 12: 13–15.
Esselman Elizabeth J., Crawford Daniel J., Brauner Soren, Stuessy Tod F., Anderson Gregory J., O. Mario Silva (2000): RAPD Marker Diversity within and Divergence among Species of Dendroseris (Asteraceae: Lactuceae). American Journal of Botany, 87, 591-
Feng S. P., Li W. G., Huang H. S., Wang J. Y., Wu Y. T. (2009): Development, characterization and cross-species/genera transferability of EST-SSR markers for rubber tree (Hevea brasiliensis). Molecular Breeding, 23, 85-97
Figueiredo Neto A., Almeida F.A.C., Gouveia Jpg D.E., Nobrega M.B.M., Carneiro R.M., Pedroza J.P. (2004): Genetic divergence in accessions of castor bean (Ricinus communis L.) based on characteristics of seed. Journal of Biology and Earth Sciences, 4: 1–10.
Foster Jeffrey T, Allan Gerard J, Chan Agnes P, Rabinowicz Pablo D, Ravel Jacques, Jackson Paul J, Keim Paul (2010): Single nucleotide polymorphisms for assessing genetic diversity in castor bean (Ricinus communis). BMC Plant Biology, 10, 13-
Gaginella T. S., Capasso F., Mascolo N., Perilli S. (): Castor oil: new lessons from an ancient oil. Phytotherapy Research, 12, S128-S130<S128::AID-PTR272>3.0.CO;2-I
Gajera Bhavesh B., Kumar Nitish, Singh Amritpal S., Punvar Bhupendra Singh, Ravikiran R., Subhash N., Jadeja G.C. (2010): Assessment of genetic diversity in castor (Ricinus communis L.) using RAPD and ISSR markers. Industrial Crops and Products, 32, 491-498
Gogoi S.N., Sarma R.N., Rajan R.K. (2011): Genetic diversity of castor (Ricinus communis L.) germplasm in North-eastern region of India. Indian Journal of Sericulture, 50: 51–57.
Govaerts R., Frodin D.G, Radcliffe-Smith A. (2000): World Cheklist and Bibliography of Euphorbiaceae (with Pandaceae). Trowbridge, Redwood Books, Ltd.
Jain Sunita, Jain Rajinder K., McCouch Susan R. (2004): Genetic analysis of Indian aromatic and quality rice (Oryza sativa L.) germplasm using panels of fluorescently-labeled microsatellite markers. Theoretical and Applied Genetics, 109, 965-977
Jeong Gwi-Taek, Park Don-Hee (2009): Optimization of Biodiesel Production from Castor Oil Using Response Surface Methodology. Applied Biochemistry and Biotechnology, 156, 1-11
Kaiser H. F. (1960): The Application of Electronic Computers to Factor Analysis. Educational and Psychological Measurement, 20, 141-151
Kanti M., Anjani K., Venkatramya K. (2014): Molecular Diversity in Castor Germplasm Collection Originated from North-Eastern Hill Province of India. International Journal Research for Scientific Innovations, 1: 1–6.
Perseguini Juliana Morini Küpper Cardoso, Chioratto Alisson Fernando, Zucchi Maria Imaculada, Colombo Carlos Augusto, Carbonell Sérgio Augusto Moraes, Mondego Jorge Mauricio Costa, Gazaffi Rodrigo, Garcia Antonio Augusto Franco, Campos Tatiana de, Souza Anete Pereira de, Rubiano Luciana Benchimol (2011): Genetic diversity in cultivated carioca common beans based on molecular marker analysis. Genetics and Molecular Biology, 34, 88-102
Lowrey Timothy K., Crawford Daniel J. (1985): Allozyme Divergence and Evolution in Tetramolopium (Compositae: Astereae) on the Hawaiian Islands. Systematic Botany, 10, 64-
Meinders Hadley C., Jones Melvin D. (1950): Pollen Shedding and Dispersal in the Castor Plant Ricinus communis L.1. Agronomy Journal, 42, 206-
Milani M., Dantas F.V., Martins W.F.S. (2009): Genetic divergence among castor bean genotypes by morphologic and molecular characters. Revista Brasileira de Oleaginosas e Fibrosas, 13: 61–71.
Moshkin V.A (ed.) (1986): Castor. New Delhi, Amerind Publishing Co., Pvt. Ltd.
OGUNNIYI D (2006): Castor oil: A vital industrial raw material. Bioresource Technology, 97, 1086-1091
Perrier X., Flori A., Bonnet F. (2003): Data analysis methods. In: Hamon P., Seguin M., Perrier X., Glaszmann J.C. (eds): Genetic Diversity of Cultivated Tropical Plants. Montpellier, Enfield, Science Publisher: 43–76.
Pinzi S., Garcia I. L., Lopez-Gimenez F. J., Luque de Castro M. D., Dorado G., Dorado M. P. (2009): The Ideal Vegetable Oil-based Biodiesel Composition: A Review of Social, Economical and Technical Implications. Energy & Fuels, 23, 2325-2341
Qiu Lijun, Yang Chun, Tian Bo, Yang Jun-Bo, Liu Aizhong (2010): Exploiting EST databases for the development and characterization of EST-SSR markers in castor bean (Ricinus communis L.). BMC Plant Biology, 10, 278-
Reif J. C., Gumpert F.-M., Fischer S., Melchinger A. E. (2007): Impact of Interpopulation Divergence on Additive and Dominance Variance in Hybrid Populations. Genetics, 176, 1931-1934
Rivarola Maximo, Foster Jeffrey T., Chan Agnes P., Williams Amber L., Rice Danny W., Liu Xinyue, Melake-Berhan Admasu, Huot Creasy Heather, Puiu Daniela, Rosovitz M. J., Khouri Hoda M., Beckstrom-Sternberg Stephen M., Allan Gerard J., Keim Paul, Ravel Jacques, Rabinowicz Pablo D., Pellegrini Matteo (2011): Castor Bean Organelle Genome Sequencing and Worldwide Genetic Diversity Analysis. PLoS ONE, 6, e21743-
SANTALLA M., POWER J. B., DAVEY M. R. (1998): Genetic diversity in mung bean germplasm revealed by RAPD markers. Plant Breeding, 117, 473-478
Sathaiah V., Reddy T.P. (1983): Inheritance of isoperoxidases in castor. In: 15th Int. Congress of Genetics, Dec 12–21, 1983, New Delhi, Abstracts Part 1: 387.
Sathaiah V., Reddy T.P. (1984): Qualitative and quantitative analysis of peroxidase and esterase enzymes in castor (Ricinus communis L.). Indian Journal of Botany, 7: 68–73.
Sathaiah V., Reddy T.P. (1988): Esterase isozyme patterns of nine parental diallel set of castor (Ricinus communis L.). In: Proc. Conf. Cytology Genetics, 1: 240–246.
Sayama T., Hwang T.-Y., Komatsu K., Takada Y., Takahashi M., Kato S., Sasama H., Higashi A., Nakamoto Y., Funatsuki H., Ishimoto M. (): Development and Application of a Whole-Genome Simple Sequence Repeat Panel for High-Throughput Genotyping in Soybean. DNA Research, 18, 107-115
Scholz Volkhard, da Silva Jadir Nogueira (2008): Prospects and risks of the use of castor oil as a fuel. Biomass and Bioenergy, 32, 95-100
Singh A.K. (2011): Castor oil-based lubricant reduces smoke emission in two-stroke engines. Industrial Crops and Products, 33, 287-295
SOLTIS PAMELA S., SOLTIS DOUGLAS E., TUCKER TRACY L., LANG FRANK A. (1992): Allozyme Variability Is Absent in the Narrow Endemic Bensoniella oregona (Saxifragaceae). Conservation Biology, 6, 131-134
Talia Paola (2010): Genetic mapping of EST-SSRs, SSR and InDels to improve saturation of genomic regions in a previously developed sunflower map. Electronic Journal of Biotechnology, 13, 0-0
Tessier C., David J., This P., Boursiquot J. M., Charrier A. (1999): Optimization of the choice of molecular markers for varietal identification in Vitis vinifera L.. TAG Theoretical and Applied Genetics, 98, 171-177
Vivodík M., Balážová Z., Gálová Z. (2014): RAPD analysis of genetic diversity of castor bean. International Journal of Biological, Veterinary, Agricultural and Food Engineering, 8: 615–618.
Ward Joe H. (1963): Hierarchical Grouping to Optimize an Objective Function. Journal of the American Statistical Association, 58, 236-244
Williams John G.K., Kubelik Anne R., Livak Kenneth J., Rafalski J.Antoni, Tingey Scott V. (1990): DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Research, 18, 6531-6535
download PDF

© 2022 Czech Academy of Agricultural Sciences | Prohlášení o přístupnosti