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Biotransformation of food waste into biofertilisers through composting and anaerobic digestion: a reviewReviewNurul Solehah Mohd Zaini, Abedelazeez J.D. Khudair, Aliah Zannierah Mohsin, Elicia Jitming Lim, Wakisaka Minato, Hamidah Idris, Jamilah Syafawati Yaacob, Muhamad Hafiz Abd RahimPlant Soil Environ., 2023, 69(9):409-420 | DOI: 10.17221/101/2023-PSE A growing world population means greater pressure on earth’s resources. Currently, 30% of food is wasted, which poses a significant risk to both humans and the environment. One way to offset the growth in food waste (FW) is through the process of microbial bioconversion, whereby FW is transformed into a range of nutrient-dense biofertilisers. This approach not only promotes a highly desirable circular economy, but it can also reduce the use of inorganic fertilisers, which adversely impact the environment through increased greenhouse gases, changes in soil and water characteristics, and loss of biodiversity. The bioconversion of FW to biofertiliser relies on the processes of aerobic (composting) and anaerobic digestion. Recently, alternative decomposition techniques included growing specific beneficial microbes, such as effective microorganisms, to speed up the breakdown process. Microorganisms can act as biostimulants and biodecomposers, possessing nutrient-fixing abilities and providing protection from biotic and abiotic stresses, thus enhancing plant growth and overall health. The potential uses of FW are complex and diverse, but research is actively done to effectively utilise this resource for biofertiliser applications. |
Estimation of Fagus orientalis Lipsky height using nonlinear models in Hyrcanian forests, IranOriginal PaperMohammad Rasoul Nazari Sendi, Iraj Hassanzad Navroodi, Aman Mohammad KaltehJ. For. Sci., 2023, 69(10):415-426 | DOI: 10.17221/93/2022-JFS Tree height is one of the most important variables in describing forest stand structure. However, due to difficulty in height measurement, especially in dense and mountainous forests, the common approach is to invoke the height-diameter (H-D) models. The oriental beech (Fagus orientalis Lipsky) is one of the most important species of Hyrcanian forests, over the mid to high-altitudes (400–1 800 m a.s.l.), in northern Iran. In this study, the H-D relationship of beech trees was investigated separately for mid-altitude and high-altitude in Shafaroud forests of Guilan using 14 nonlinear H-D models and an artificial neural network model (ANN). To collect data, a systematic random sampling method within a 100 × 100 m regular randomized grid was applied. In total, 3 243 individual trees in 255 circular plots with 0.1 ha were measured. For comparing the results, performance criteria including root mean square error (RMSE), R2adj, Akaike's information criterion (AIC), and mean absolute error (MAE) were used. In high and mid altitudes, Meyer (1940) and Bates and Watts (1980) models had the best performance, while Watts (1983) model and Burkhart-Strub (1974) model had the worst performance in high-altitude and in mid-altitude, respectively. On the other hand, the ANN model had the best accuracy and performance in both sites. Since the performance of the ANN model is superior and consistent compared to the common nonlinear models, here it is preferred for both regions. |
Overview of the control of plant fungal pathogens by natural products derived from medicinal plantsReviewMing Jiang, Tong Wang, Jesus Simal-Gandara, Chandra Nayaka Siddaiah, Xiaofeng Dai, Jieyin Chen, Dan Wang, Zhiqiang KongPlant Protect. Sci., 2023, 59(4):303-316 | DOI: 10.17221/17/2023-PPS Chemical fungicides can cause drug resistance of plant pathogenic fungi, environmental pollution, and potential threats to humans and animals. Therefore, developing low-toxicity, high-efficient and environment-friendly biological control products is critical for green prevention, controlling plant fungal diseases, and maintaining ecological balance. Biocontrol research mainly includes the following aspects: antagonistic microorganisms, fungicidal proteins, RNA interference techniques and botanical fungicides. Significantly, natural products extracted from medicinal plants are valuable repertoire for inhibiting plant fungal diseases. This review systematically reviewed the research advances of using natural products from medicinal plants to inhibit plant pathogenic fungi, including the types of natural products, extraction methods, and antifungal mechanisms. The further prospects for the study and application, which provide the reference for botanical fungicide development and practical application in preventing and controlling plant fungal disease, were also discussed. |
Comparison of potassium quantity-intensity relationships in tropical paddy soil under tillage and no-tillage systems after fifteen growing seasonsOriginal PaperSoni Isnaini, Maryati, A. Arivin RivaiePlant Soil Environ., 2023, 69(1):1-9 | DOI: 10.17221/337/2022-PSE The information on the behaviour of potassium (K+) in tropical paddy rice soils, which is important for a better understanding of the plant availability of K+ is still very limited. We compared the quantity-intensity (Q/I) relationships for K+ under conventional tillage and no-tillage systems in tropical paddy fields in the absence and presence of K+ fertiliser in the addition of nitrogen. The results showed that the values of the activity ratio for K (ARK) and potential buffering capacities (PBCK) in the no-tillage rice field were respectively 16% and 33% higher than that in the conventional tillage field. With the addition of K fertiliser, the value of exchangeable K in equilibrium (ΔK0) in the no-tillage paddy field was 67.9% greater than that in the conventional tillage field. This indicates that K fertilisation is more efficient when applied on a no-tillage paddy field. When the K fertiliser was added (49.8 kg K/ha), the application of N fertiliser at the rate of 115 and 184 kg N/ha resulted in a higher ARK value than that at the rate of 46 kg N/ha. This suggests that the simultaneous application of K and N fertiliser was able to increase exchangeable K in the soil. The application of no-tillage increased of the dry grain yield of rice (about 10%) compared with the application of conventional tillage. Meanwhile, there were significant relationships between the rice yield with the ARK and ΔK0. Moreover, the ARK was significantly correlated with K-uptake. |
Thin layer drying characteristics of alligator pepper, ginger and turmericOriginal PaperAdebayo Olasunkanmi Salau*, Babatunde Sunday Ogunsina, Adewale Waliu Adebayo, Adekunle Felix OkunadeRes. Agr. Eng., 2023, 69(1):1-8 | DOI: 10.17221/71/2021-RAE The delightful pungency, aromatic compounds and phytochemicals in some spices make them indispensable in local food systems and native medicine, hence, driving a robust market in many parts of the world. The understanding of their drying characteristics is very important for processing and adding value, and a thin layer drying study is a proven method for achieving this. In this study, changes in the moisture content, moisture ratio, drying rate and effective diffusivity of alligator peppers, ginger and turmeric were investigated at three drying temperatures 50, 60, and 70 °C following standard procedures. Five models were proposed to simulate the drying process. Non-linear regression was used to establish the coefficient of determination (R2), sum of square error (SSE) and root mean square error (RMSE) for each model to determine the model of the best fit. The Page model gave the best fit for ginger while the logarithmic model was best fitted for alligator peppers and turmeric. The effective diffusivity ranged from 1.79–3.08 × 10–9, 8.44–9.74 × 10–9, and 4.06–6.49 × 10–9 m2·s–1 for alligator peppers, ginger and turmeric, respectively. The activation energy ranged from 16.5–22 kJ·mol–1·K–1 for the three spices. These findings promise improvement in the drying, processing and handling of spices, thereby boosting the obtainable income from the value chain. |
Coumarin derivatives as antifungal agents – A reviewReviewMirjana Lonèar, Dajana Ga¹o-Sokaè, Maja Molnar*Czech J. Food Sci., 2023, 41(2):79-91 | DOI: 10.17221/178/2021-CJFS Coumarins and pyridines are a promising class of naturally occurring bioactive heterocycles with unique physical and chemical properties. Compounds containing the coumarin framework possess a wide range of pharmacological, biological, and physiological activities, which makes them important for application in medicine, the food industry and agriculture. Among all coumarins' properties, it was found that coumarins may prevent fungal growth, depending on substituents linked to the coumarin core. Therefore, many coumarin derivatives have been investigated as potentially powerful agents in preventing and controlling fungal pathogens. This review summarises the latest research on coumarins and their antifungal activity to provide useful information for further developing more efficient coumarin-based fungicides. |
A novel hybrid feature method for weeds identification in the agriculture sectorOriginal PaperSheeraz Arif Arif, Rashid Hussain, Nadia Mustaqim Ansari, Waseem RaufRes. Agr. Eng., 2023, 69(3):132-142 | DOI: 10.17221/77/2022-RAE Weed identification and controlling systems are gaining great attention and are very effective for large productivity in the agriculture sector. Currently, farmers are facing a weed control and management problem, and to tackle this challenge precision agriculture in the form of selective spraying is much-needed practice. In this article, we introduce a novel framework for a weed identification system that leverages (hybrid) the robust and relevant features of deep learning models, such as convolutional neural network (CNN) and handcrafted features. First, we apply the image pre-processing and augmentation techniques for image quality and dataset size enhancement. Then, we apply handcrafted feature extraction techniques, such as local binary pattern (LBP) and histogram of oriented gradients (HOG) to extract texture and shape features from the input. We also apply the deep learning model, such as CNN, to capture the relevant semantic features. Lastly, we concatenate the features extracted from a different domain and explore the performance using different classifiers. We achieved better performance and classification accuracy in the presence of the extreme gradient boosting (XGBoost) classifier. The achieved results witnessed the effectiveness and applicability of the given method and the importance of concatenated features. |
Detection of high erosion risk areas and their incorporation into environmental impact assessmentOriginal PaperEfrén Tarancón-Andrés, Jacinto Santamaria-Peña, David Arancón-Pérez, Eduardo Martínez-Cámara, Julio Blanco-FernándezSoil & Water Res., 2023, 18(2):102-115 | DOI: 10.17221/91/2022-SWR Life Cycle Assessment (LCA) is normally used independently of the physical and temporal location of the product, process or service under analysis. This makes LCA results more easily comparable and globally accepted. At the same time, it has drawbacks though, e.g. land use will have the same impact regardless of location. However, the use of certain terrains in high erosion risk areas as compared to others in low erosion risk areas will have a different impact on the ecosystem. The availability of airborne Light Detection and Ranging (LiDAR) data (ALS) allows a quick and accurate morphogeometric analysis of any terrain. For this reason, this article offers a methodology, based on Revised Universal Soil Loss Equation (RUSLE) method and airborne LiDAR data, for the straightforward detection of zones with high vulnerability to erosion problems. Based on these local erosion risk data, a method is developed to assess the environmental impact of land use, based on its location. In this way, the LCA methodology is incorporated to gather local data, dependent on the specific location of the activity under analysis. The methodology developed has been applied, as a case study, to a specific municipality in the high mountains of the Autonomous Community of La Rioja (Spain). |
Identification of nitrification inhibition in maize to mitigate soil nitrogen lossOriginal PaperAzizah Firdausi Nur, Purwanto Benito Heru, Tawaraya Keitaro, Rachmawati DiahPlant Soil Environ., 2023, 69(8):387-399 | DOI: 10.17221/148/2023-PSE Nitrogen dynamics in soil produce N2O emissions. To decrease N2O emissions and conserve N, recent studies have focused on chemicals derived from root exudates that inhibit nitrification. However, selective plant breeding could be used to control nitrification activity in soil instead of fertilisers or synthetic nitrification inhibitors. In this study, we investigated the relationship between nitrification rates (NR) and related N dynamics and plant characteristics for 11 maize varieties with varying levels of nitrification inhibition (NI) compared to Brachicaria humidicola (Bh) as the positive control. In a greenhouse experiment, soil concentrations of NI, NR, NH4+-N, and NO3--N and nitrogen uptake by plants were measured. Six maize varieties had a 1.1–1.6 times lower NR than Bh. Low-NR varieties had higher NI and lower root-to-shoot ratios. NI was positively correlated with total N and shoot N content but not with cumulative N2O and NH4+-NO3-. These results show that maize has the capacity to reduce soil nitrification while increasing the total N in the soil and shoot N content in maize. |
Effects of exogenous ascorbic acid on photosynthesis and xanthophyll cycle in alfalfa (Medicago sativa L.) under drought and heat stressOriginal PaperYaqian Zong, Chao Xu, Kai Zhou, Xinhui Duan, Bo Han, Chenggang He, Hua JiangPlant Soil Environ., 2023, 69(11):487-499 | DOI: 10.17221/330/2023-PSE Alfalfa is an important leguminous plant, yield and quality depend on the growing environment, while effects of drought and heat stress on alfalfa leaves are unknown. This study was conducted to evaluate the effect of exogenous ascorbic acid (AsA) on photosynthesis, chlorophyll fluorescence, and xanthophyll cycle in alfalfa leaves subject to under drought and heat stress. The results suggest that drought and heat stress caused decreases in the net photosynthetic rate (Pn) in alfalfa leaves, but stomatal conductance (gs), transpiration rate (Tr), and intercellular CO2 concentration (ci) were increased. The application of AsA could alleviate these changes to some extent. Besides, the decreased photosystem II (PSII) maximum photochemical efficiency (Fv/Fm) and violaxanthin (V) contents and significantly increased non-photochemical quenching (NPQ) levels. The increased NPQ corresponds to the de-epoxidation state (DPS) of xanthophyll pigments. In the AsA-pretreated alfalfa plants, the Fv/Fm and the NPQ were elevated, indicating that AsA could alleviate the adverse effects on photosynthesis induced by this stress. The violaxanthin de-epoxidase (VDE) enzyme activity was inhibited by drought and heat stress, and AsA significantly increased VDE enzymatic activity on the 2nd and 8th days. In summary, photoinhibition of PSII occurred in alfalfa leaves under drought and heat stress, resulting in decreased photosynthetic activity. Exogenous AsA can enhance the photosynthetic capacity of the plant, and enhance the drought and heat resistance of alfalfa. |
Monitoring of milk performance of Wallachian sheep grazed under traditional Carpathian management in Western Beskids locationOriginal PaperMartin Ptáèek, Michal Milerski, Tereza Michlová, Jaromír Ducháèek, Vladimír Tanèin, Michal Uhrinèa», Jitka Schmidová, Filipp Georgijeviè Savvulidi, Ludìk StádníkCzech J. Anim. Sci., 2023, 68(11):460-468 | DOI: 10.17221/85/2023-CJAS This study aimed to determine the potential of Wallachian sheep in quantitative and qualitative indicators of milk production under extensive conditions of the Western Beskids mountains. Milk samples were collected from the group of 38 non-dairying sheep selected from the basic 120-head flock. Ewes were monitored during four control days (from 27th April, the average 42nd day of lactation to 4th August, the average 142nd day of lactation) to cover the whole lactation period. Ewes were investigated for their milk production and for milk quantity parameter. Milk quality indicators included percentage estimation of milk components (fat, protein, casein, lactose, dry matter), somatic cell count (103 cells/ml), vitamin A and E content (mg/kg), and K, Mg, Ca, Zn, Cu (mg/kg) content. Milk production ranged from 1 017.37 g (early stage of lactation) to 416.87 g (late stage of lactation period). The milk contained high fat (6.06–8.44%) and protein (4.68–5.68%) percentages, low somatic cell count and favourable distribution of minerals and vitamins. In general, results of this study indicate a possibility for low-productive traditional grazing system with extensive sheep breeds not only for cultivating the area but also for the purpose of high nutritional food with beneficial aspect on human health. |
QTL localisation of seed-related traits in Tibetan hulless barley based on a high-density single-nucleotide polymorphism genetic mapOriginal PaperYan Wang, Xiaohua Yao, Youhua Yao, Yixiong Bai, Likun An, Xin Li, Yongmei Cui, Kunlun WuCzech J. Genet. Plant Breed., 2023, 59(2):95-108 | DOI: 10.17221/74/2022-CJGPB The effective use of high-quality and high-yielding germplasm resources is of great importance for the development of hulless barley varieties. Therefore, the search for such resources has long been a goal of the breeding community. In this study, a genotyping-by-sequencing (GBS) analysis was performed on an F2 (Nierumuzha × Kunlun 10) population. A high-density genetic map of hulless barley was constructed, which contained 1 475 efficient single-nucleotide polymorphism markers with 7 052 bin markers. The total length of the seven chromosomes was 1 139.4 cM, with an average marker distance of 0.59 cM. Based on this high-density linkage map, a total of 54 quantitative trait loci (QTLs) related to the seed traits were detected, including seed colour (SC), thousand kernel weight (TKW), seed average area (SAA), seed perimeter (SP), seed length (SL), seed width (SW), seed length/width (SLW), seed diameter (SD), and seed circular degree (SCD). These QTLs explained 3.32–35.73% (mean = 11.45%) of the phenotypic interpretation, including 24 main QTLs and 30 epistatic QTLs. A total of 24 candidate genes were identified within the QTL region, including one SC-associated transcription factor (ANT1), two TSW-related genes, a transcription factor (NAC021), a gene associated with the non-homologous end joining (NHEJ) pathway (ku70), three SAA-associated genes (LOL2, NAC021, TSK), two SL-associated genes (MADS21, MADS4), six SW-associated genes (FIP1, NAC021, DREB 1A, HVA22A, CYP78A6, SAUR71), five LW-related genes (NAM-B2, CRY1, LHY, CYP710A1, WRKY72), two SP-related genes (SKIP11, TCP18), two SD-related genes (NAC021, SKIP8), and three SCD-related genes (MYB1R1, RAX3, NAC100). These genes are involved in the regulation of the cell development, material transport, signal transduction, and plant morphogenesis and play an important role in the regulation of agronomic traits in hulless barley. The high-density genetic mapping and QTL identification of the seed traits in hulless barley provide a valuable genetic resource and the basis for further molecular marker-assisted selection and genomic studies. |
In vitro simulation of drought stress in some Iranian Damask rose landracesOriginal PaperHanifeh Seyed Hajizadeh, Sara Rezaei, Fataneh Yari, Volkan OkatanHort. Sci. (Prague), 2023, 50(1):45-60 | DOI: 10.17221/107/2021-HORTSCI Rosa damascena is one of the oldest valuable rose flower varieties that is almost drough tolerant. However, selecting and identifying landraces that are more tolerant to drought conditions will be effective in developing the cultivation of the plant under stress. The most important step in developing drought-tolerant plants is the evaluation and identification of resistant and susceptible genotypes. In this case, an experiment was performed under in vitro conditions using five levels (0, 25, 50, 75, and 100 g/L) of polyethylene glycol (PEG) on four landraces of the Damask rose (Maragheh, Urmia, Pakdasht, and Kashan). Based on the findings, the resistance of the different landraces to a water deficit was measured by the Design-Expert software using the response level (RSM) method. The results showed that Maragheh, with the highest fresh and dry weight, total chlorophyll, chlorophyll a, chlorophyll b, proline and an increase in the superoxide dismutase activity, had a high tolerance to drought stress. Moreover, Maragheh with a decreasing leaf number, height, malondialdehyde, hydrogen peroxide and having a higher membrane stability index, showed a better defence mechanism against oxidative stress than the other landraces. Also, after Maragheh, Pakdasht had the best performance compared to the other two landraces up to 75g/L of PEG, but not as well as Maragheh at the highest level of the tested PEG. Urmia and especially Kashan probably do not have much tolerance to drought stress regarding all the results and levels of desirability. |
Assessment of genetic variation and population structure in Iraqi barley accessions using ISSR, CDDP, and SCoT markersOriginal PaperNawroz Tahir, Djshwar Lateef, Kamaran Rasul, Didar Rahim, Kamil Mustafa, Shokhan Sleman, Avin Mirza, Rebwar AzizCzech J. Genet. Plant Breed., 2023, 59(3):148-159 | DOI: 10.17221/112/2022-CJGPB The objective of this study was to investigate the diversity of 59 accessions of barley using inter simple sequence repeat (ISSR), conserved DNA-derived polymorphism (CDDP), and start codon targeted (SCoT) markers. A total of 391 amplified polymorphic bands were generated using 44 ISSR, 9 CDDP, and 12 SCoT primers that produced 255, 35, and 101 polymorphic bands, respectively. The average values of gene diversity were 0.77, 0.67, and 0.81 for ISSR, CDDP, and SCoT markers, respectively. The mean values of polymorphism information content for ISSR, CDDP and SCoT markers were 0.74, 0.63, and 0.80 respectively. The discrimination power of the three approaches for assessing allelic diversity in barley accessions ranked as follows: SCoT > ISSR > CDDP. The barley accessions were classified and clustered into two main groups. Molecular variance analysis revealed 15, 9, and 14% variability among populations with ISSR, CDDP, and SCoT markers, respectively. The Mantel test results revealed that the three molecular marker matrices had significant positive relationships. The SCoT markers might be useful tools for selecting appropriate parents for a breeding program. |
Seasonal dynamics and abundance of brown marmorated stink bug Halyomorpha halys (Stål) on four trap cropsOriginal PaperLuka Batistiè, Tanja Bohinc, Stanislav TrdanPlant Protect. Sci., 2023, 59(3):264-277 | DOI: 10.17221/2/2023-PPS The main purpose of the study was to examine the potential of crops, such as soybeans (Glycine max), sunflowers (Helianthus annuus), alfalfa (Medicago sativa), and sorghum (Sorghum bicolor), as trap crops for Halyomorpha halys. We monitored the abundance and seasonal dynamics of H. halys (egg clusters, larvae, and adults) on a selected number of various crops at 10-day intervals. The experiment was performed in two different regions of Slovenia (western and central) and in two different years (2021, 2022). The results varied depending on the location and the year. In the first experiment, data from the entire year showed that sorghum was the most attractive for H. halys adults (1.56 ± 0.12), followed by sunflowers (0.61 ± 0.05), soybeans (0.37 ± 0.03) and alfalfa (0.41 ± 0.21). In the second experiment, the abundance numbers of the pest were significantly lower compared to those of the first experiment [sorghum and soybeans (0.003 3 ± 0.002), sunflowers (0.000 3 ± 0.000 3)]. In both cases, the abundance numbers increased when all the crops entered the fruit development stage (BBCH 70+). Overall, the lower density of the H. halys population and the experimental design could also be some of the factors for such a low incidence of stink bugs in the central region of the country. More research will be needed to further develop effective control methods for this invasive pest. |
Implications of surfactant application on soil hydrology, macronutrients, and organic carbon fractions: An integrative field studyOriginal PaperCansu Almaz, Recep Serdar Kara, Markéta Miháliková*, Svatopluk MatulaSoil & Water Res., 2023, 18(4):269-280 | DOI: 10.17221/88/2023-SWR This study investigates the effects of repeated applications of the non-ionic soil surfactant H2Flo (ICL-SF Inc., Israel) on the soil water content, hydraulic conductivity, nutrient distribution, and organic carbon fractions (OCFs) in non-hydrophobic loamy sand soils under subsurface drip irrigation. Our results indicate that H2Flo treatment reduces both saturated and unsaturated hydraulic conductivity while promoting the uniform irrigation distribution, consistent with previous findings on surfactants’ effects on sandy soils. An increase in soil pH levels, organic carbon content, and extractable magnesium, calcium, and potassium was observed in treated soils, with elevated levels of potassium permanganate oxidizable organic carbon (POXC) implying accelerated decomposition rates. Notably, a positive linear relationship was found between POXC and the increased NO3–-N content of treated soils, suggesting induced conditions of nitrification. However, the carbon fractions water-soluble organic carbon (Cws) and hot water-soluble organic carbon (Chws) remained quantitatively unchanged, even though they exhibited a positive linear relationship with the soil’s hydraulic conductivity. The study highlights the crucial role of monitoring changes in OCFs and nutrient dynamics after surfactant application to optimize soil organic matter utilization and chemical fertilizer management. |
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Assessing the insecticidal effect of Citrus aurantium and Nerium oleander extracts and basalt "Farina di Basalto®“ as biological alternatives to control Aphis punicae and Planococcus citri in an organic pomegranate orchardOriginal PaperMohamed Elimem, Rym Jaouadi, Thameur Bouslema, Maha Kalboussi, Chaima Lahfef, Slim Rouz, Hassan Kharroubi, Abdennacer Boulila, Sofien Kouki, Giuliano Ragnoni, Gianluca Pizzuti, Fabio Primavera, Alessandro RicciniPlant Protect. Sci., 2023, 59(4):356-368 | DOI: 10.17221/111/2022-PPS
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Effect of warm and cold stratification, and ethanol treatment on germination of Corylopsis seedsOriginal PaperJ.H. Kim, A.K. Lee, J.K. SuhHort. Sci. (Prague), 2016, 43(2):84-91 | DOI: 10.17221/351/2014-HORTSCI Seed germination experiments with Corylopsis coreana, C. sinensis var. calvescens, and Corylopsis gotoana were conducted. Corylopsis coreana seeds were treated at 5o, 7.5o, 10o, 12.5o and 20oC to study the upper temperature limit to break dormancy. Seeds of C. sinensis var. calvescens were treated 1 mo of warm stratification (WS) at 10, 15, 20, and 25oC followed by CS at 5oC for 0, 1, 2, and 3 mo to understand the requirement of WS and CS to effectively break dormancy. Germination of Corylopsis seeds at 15o-20oC without CS suggests that dormancy is considered shallow and the upper temperature limit to break is 12.5oC. Immersing seeds in water or ethanol induced seed germination which may result from leaching of inhibitors from the seed. Observation of seed coats following treatment with water and ethanol by means of low temperature scanning electron microscopy (LT-SEM) revealed elongated and rectangular/hexagonal shaped cells in C. coreana and irregular jigsaw puzzle-piece shapes in C. gotoana. In conclusion, dormancy in Corylopsis is considered shallow and the optimum CS is suggested to be 7.5oC, while optimum WS is ranging from12.5o to 20oC. |
Horizontal and vertical distribution of carbon stock in natural stands of Hyrcanian lowland forests: A case study, Nour Forest Park, IranOriginal PaperA.A. Vahedi, A.R. Bijani-Nejad, A. DjomoJ. For. Sci., 2016, 62(11):501-510 | DOI: 10.17221/49/2016-JFS The Nour Forest Park located in the north of Iran is the most important Hyrcanian lowland forest which plays a significant role in the local/national carbon cycle. Since the forest is protectively managed, the distribution of C pools in the forest may give proper information for climate change negotiations. We investigated variations in above- and belowground C pools between three natural stand types that occur in the forest - Alnus glutinosa-Parrotia persica (AI), Acer velutinum-Parrotia persica (MI), and Ulmus glabra-Carpinus betulus (EH). The carbon stocks of trees, herbs and litter were measured in each stand based on a completely randomized design using nested plots. Soil organic carbon (SOC) stock was measured at two depths (0-20 and 20-40 cm). The mean organic carbon concentration of 20.61 ± 0.012% and of 31.13 ± 0.024% was directly measured for herbs and litter, respectively. The results of the paired t-test showed that there was no significant difference in SOC between the first depth (0-20 cm) and the second depth (20-40 cm) in AI stand though SOC was significantly different between the two depths in MI and EH stands. The carbon stock of above- and belowground biomass was not significantly different between the three stands, and carbon stock of litter was higher than that of herbs in each stand. Also, there were significant differences in the different carbon pools in each stand type; however, the different stand types did not differ in the proportion of carbon stored in different pools and in total carbon (i.e. C summed across all pools; P > 0.05). The findings in the different forest types showed that there was no high carbon stock variability suggesting that the horizontal and vertical distribution of carbon stocks in the forest could be in a balance, implying that the protective management could be a determining factor for the carbon balance in the forest. Regarding this issue, it is necessary to verify the variation of carbon stocks in non-protective and active forest management. |
Molecular profiling of bacterial species in the geese cecumB.Y. Liu, Z.Y. Wang, H.R. Wang, P. Hu, D. Xu, Q. WangCzech J. Anim. Sci., 2011, 56(4):192-203 | DOI: 10.17221/1433-CJAS The purpose of this study was to analyse the microbial diversity in the caecum of geese using a 16S ribosomal RNA gene (rRNA) clone library approach. A total of 160 clones and 124 clones were sequenced and phylogenetically analysed from the contents and mucosa of the caecum of Yang Zhou geese, respectively. The result indicated that there was a rich variety of bacteria in the caecum contents. Forty-six operational taxonomic units (OTUs) based on a 98% similarity criterion were classified in the contents of goose caecum, as compared to 29 OTUs based on a 97% similarity criterion in the mucosa of goose caecum. The sequences were assigned to 7 and 5 groups in the contents and mucosa of goose caecum, respectively. Contents of goose caecum were dominantly occupied by Clostridia-related species (58.7%) with other abundant sequences being related to Bacteroidetes (26.9%) and Erysipelotrichi (11.2%). Gammaproteobacteria (59.6%) and Clostridia (20.1%) were predominant in the mucosa of goose caecum. |
Immunohistochemical analysis of metastasising hepatocellular carcinomas in dogsOriginal PaperR. Ciaputa, P. Bandoch, K. Lewandowska, J.A. Madej, M. Kandefer-Gola, I. Janus, M. NowakVet Med - Czech, 2016, 61(10):546-552 | DOI: 10.17221/51/2016-VETMED In this study, the immunohistochemical features of primary hepatocellular carcinomas and their metastases in visceral organs, including the lungs, spleen and kidneys were examined using antibodies against carcino-embryonic antigen (CEA) cytokeratin (CK) 7 and 20, CD4, CD8, minichromosome maintenance protein 3 (MCM3), vimentin, and alpha 1 foetoprotein (AFP). In addition, Mallory's connective tissue stain, van Gieson's stain and Gomori methenamine silver stain were used. The study was performed on liver samples collected post mortem from five mixed-breed dogs aged 9-12 years. The tumours were classified according to the World Health Organization Classification of Tumours. Strong expression of MCM3 and AFP was found in the hepatic cancer cells and in the metastases to the lungs, spleen and kidneys. The primary tumours and metastatic foci did not react positively with the anti-CD4, anti-CD8, CEA, CK7 and CK20 antibodies. The connective tissue in the primary tumour and the metastases showed a positive reaction to vimentin. Canine hepatocellular carcinomas that metastasise are highly-malignant well-differentiated tumours that produce AFP and trace amounts of both carcinoembryonic antigen and cytokeratin. Therefore, the metastasis resembles the primary tumour and has a common phenotype and genotype with the primary tumour. |
The use of CAN-Bus messages of an agricultural tractor for monitoring its operationJ. Èupera, P. SedlákRes. Agr. Eng., 2011, 57(4):117-127 | DOI: 10.17221/20/2011-RAE The development of electronic components in engine regulation leads to the possibility of obtaining a large amount of parameters of control processes. Nowadays, these data can be read in an easy way due to the properties of used networks. The data obtained from the data bus must be processed carefully; otherwise, there is a risk of erroneous results. The article presents the results of measurements performed on four tractors. We focused on comparing the fuel consumption of engines and the accuracy of flow measurement readings from the CAN-Bus of these tractors. Even the same engines may show considerable differences in fuel consumption, taken from the CAN-Bus. The maximum deviation of the measured values ranged up to around 40%. However, the value of about 41% was measured in the range of fuel consumption of around 10 kg/h, the error of that tractor at the consumption of about 40 kg/h fell to 1.5 kg/h. A significant difference occurred in the tractor with a 235 kW engine. The consumption in the range of 50 kg/h showed an error of 8.4 kg/h. An improvement of the results can be achieved using derived regression functions. Based on our experience with the measurement of other types of tractors, we know that a similar situation with the accuracy of CAN-Bus data is also an issue in other categories of vehicles. |
Musts with an increased content of lignans from added spruce knot chipsFood Analysis, Food Quality and NutritionPavla Novotná, Jan Tøíska, Pavel Híc, Josef Balík, Nadì¾da Vrchotová, Jan Strohalm, Milan Hou¹kaCzech J. Food Sci., 2016, 34(4):318-324 | DOI: 10.17221/478/2015-CJFS Red and white musts were enriched with the lignan hydroxymatairesinol, which is the main lignan contained in spruce knots. Chips from the milled spruce knots were then used to enrich grape musts. After enrichment, the musts were stored and samples were taken in 1, 5, 9, and 12 months. The samples were subjected to a variety of analyses and sensory evaluations. Analyses included hydroxymatairesinol and alpha-conidendrin content, antioxidant activity (determined by the FRAP method), content of total polyphenols, sensory evaluation (intensity of woody aroma, intensity of bitterness and astringent taste, and consumer acceptability), and must antimutagenicity. The analysis of variance allowed predicting which factors such as grape type, quantity of added wood chips, sugar addition, method of preservation, and storage time had the most significant influence on the analytical parameters (lignan content, antioxidant activity, and total polyphenol content). In all cases lignan content in the musts was significantly influenced by the addition of spruce wood chips. Total polyphenol content in the musts was significantly affected by the type of musts and by heat treatment (time of thermomaceration). Evaluation of must antimutagenicity showed that all samples, except the sample of white musts after thermomaceration without holding at temperature and without adding chips (10 g/20 kg mash), inhibited mutagenicity. |
Resistance of triticale to wheat leaf rust (Puccinia triticina)Original PaperAlena Hanzalová, Pavel Barto¹Czech J. Genet. Plant Breed., 2011, 47(1):10-16 | DOI: 10.17221/100/2010-CJGPB Reactions of winter triticale cultivars mostly from central Europe to recent and old leaf rust isolates were tested in the greenhouse. In one trial 20 cultivars were tested with 8 leaf rust isolates, collected recently from official wheat and triticale trials in the Czech Republic and Slovakia. In another trial 15 cultivars were tested with 6 old leaf rust isolates, used to identify leaf rust resistance genes in wheat. The cultivars Cando, Hortenso and Tricolor, registered in the Czech Republic, were resistant to the majority of the recent isolates. The Hungarian cultivar Tatra was resistant to all the recent isolates. The old leaf rust isolates were virulent only to a few of the triticale cultivars. Randomly selected isolates from wheat and triticale were tested on triticale cultivars and on Thatcher near isogenic lines with different Lr genes. On average, leaf rust isolates from triticale were virulent to a higher number of triticale cultivars than isolates collected from wheat and vice versa. |
Understanding grain yield: it is a journey, not a destinationP.S. BAENZIGER, I. DWEIKAT, K. GILL, K. ESKRIDGE, T. BERKE, M. SHAH, B.T. CAMPBELL, M.L. ALI, N. MENGISTU, A. MAHMOOD7, A. AUVUCHANON, Y. YEN 8, S. RUSTGI, B. MORENO-SEVILLA9, A. MUJEEB-KAZI, M.R. MORRISCzech J. Genet. Plant Breed., 2011, 47(10):S77-S84 | DOI: 10.17221/3259-CJGPB Approximately 20 years ago, we began our efforts to understand grain yield in winter wheat using chromosome substitution lines between Cheyenne (CNN) and Wichita (WI). We found that two chromosome substitutions, 3A and 6A, greatly affected grain yield. CNN(WI3A) and CNN(WI6A) had 15 to 20% higher grain yield than CNN, whereas WI(CNN3A) and WI(CNN6A) had 15 to 20% lower grain yield than WI. The differences in grain yield are mainly expressed in higher yielding environments (e.g. eastern Nebraska) indicating genotype by environment interactions (G × E). In studies using hybrid wheat, the gene action for grain yield on these chromosomes was found to be mainly controlled by additive gene action. In subsequent studies, we developed recombinant inbred chromosome lines (RICLs) using monosomics or doubled haploids. In extensive studies we found that two regions on 3A affect grain yield in the CNN(RICLs-3A) with the positive QTLs coming from WI. In WI(RICLs-3A), we found a main region on 3A that affected grain yield with the negative QTL coming from CNN. The 3A region identified using WI(RICLs-3A) coincided with one of the regions previously identified in CNN(RICLs-3A). As expected the QTLs have their greatest effect in higher-yielding environments and also exhibit QTL × E. Using molecular markers on chromosomes 3A and 6A, the favorable alleles on 3A in Wichita may be from Turkey Red, the original hard red winter wheat in the Great Plains and presumably the original source of the favorable alleles. Cheyenne, a selection from Crimea, did not have the favorable alleles. In studying modern cultivars, many high yielding cultivars adapted to eastern Nebraska have the WI-allele indicating that it was selected for in breeding higher yielding cultivars. However, some modern cultivars adapted to western Nebraska where the QTL has less effect retain the CNN-allele, presumably because the allele has less effect (is less important in improving grain yield). In addition many modern cultivars have neither the WI-allele, nor the CNN-allele indicating we have diversified our germplasm and new alleles have been brought into the breeding program in this region. |
Effect of different levels of humic acids on the nutrient content, plant growth, and soil properties under conditions of salinityOriginal PaperHussein Khaled, Hassan A. FawySoil & Water Res., 2011, 6(1):21-29 | DOI: 10.17221/4/2010-SWR In this study, the effects were investigated of salinity, foliar and soil applications of humic substances on the growth and mineral nutrients uptake of Corn (Hagein, Fardy10), and the comparison was carried out of the soil and foliar applications of humic acid treatments at different NaCl levels. Soil organic contents are one of the most important parts that they directly affect the soil fertility and textures with their complex and heterogenous structures although they occupy a minor percentage of the soil weight. Humic acids are an important soil component that can improve nutrient availability and impact on other important chemical, biological, and physical properties of soils. The effects of foliar and soil applications of humic substances on the plant growth and some nutrient elements uptake of Corn (Hagein, Fardy10) grown at various salt concentrations were examined. Sodium chloride was added to the soil to obtain 20 and 60mM saline conditions. Solid humus was applied to the soil one month before planting and liquid humic acids were sprayed on the leaves twice on 20th and 40th day after seedling emergence. The application doses of solid humus were 0, 2 and 4 g/kg and those of liquid humic acids were 0, 0.1 and 0.2%. Salinity negatively affected the growth of corn; it also decreased the dry weight and the uptake of nutrient elements except for Na and Mn. Soil application of humus increased the N uptake of corn while foliar application of humic acids increased the uptake of P, K, Mg,Na,Cu and Zn. Although the effect of interaction between salt and soil humus application was found statistically significant, the interaction effect between salt and foliar humic acids treatment was not found significant. Under salt stress, the first doses of both soil and foliar application of humic substances increased the uptake of nutrients. |
Superovulation following follicular synchronization with GnRH at random stages of the oestrous cycle in heifersH. Kohram, V. Vahedi, S. Nasrollahi, A. FarahavarCzech J. Anim. Sci., 2011, 56(1):7-14 | DOI: 10.17221/325/2009-CJAS The objective of this study was to develop a superovulatory program based on synchronization of follicular waves with GnRH which could be applied regardless of the stage of the oestrous cycle. 36 heifers were subjected to this experiment and GnRH (Cystorelin, 200 µg) was applied between Days 0 and 7 (n = 15), 8 and 12 (n = 8) or 13 and 20 (n = 13) of the oestrous cycle. Four days after GnRH treatment, all follicles ≥ 6 mm of heifers (n) were either punctured (n = 21) or left intact (n = 15). All heifers were superstimulated from Day 6 to Day 10 after GnRH treatment with 320 mg Folltropin-V. In parallel, 21 heifers were superstimulated in a conventional manner (Days 8 to 12) and were used as controls. The homogeneity of follicular inventories among Stage-groups occurred within 4 days of GnRH treatment for follicles ≥ 7 mm but only 2 days after follicular puncture for follicles 4 to 6 mm. In response to the follicular puncture, the mean number of follicles 4 to 6 mm increased in heifers of the punctured group (P < 0.01). Following the superstimulation, the follicular (P < 0.01) and ovulatory (P < 0.01) responses were higher in the punctured group than in the nonpunctured group. The in vivo production of transferable embryos in the punctured group was similar to that of the nonpunctured group but it was lower (P < 0.01) than in heifers of the control group. In conclusion, results from the present study indicate that regardless of the stage of the oestrous cycle, the homogeneity of follicular inventories following the follicular synchronization is obtained using GnRH treatment and follicular puncture. The in vivo production of embryos was severely compromised in the present study with heifers. Causes of such reduction in the in vivo production of embryos are still unknown. |
Spruce windfalls and cambioxylophagous fauna in an area with the basic and outbreak state of Ips typographusE. Kula, W. Z±beckiJ. For. Sci., 2006, 52(11):497-509 | DOI: 10.17221/4530-JFS In spruce windfalls incurred in the autumn and winter season the synusia of cambioxylophagous fauna was evaluated in the profile of a whole stem and crown branches according to the species spectrum, tree cover and intensity of attack. The fauna of windfalls in the area with the basic level of Ips typographus and in the gradation area differed by species diversity. In the gradation area, frequency of the occurrence of Ips typographus (L.) was higher by 20-40%. P. chalcographus (L.) showed decreased stem cover in the gradation area. In the area with the basic state of Ips typographus, windfalls were intensively colonized by secondary species Hylurgops palliatus (Gyll.), Isarthron fuscum (Fabr.), Monochamus sp. With the increasing dbh (diameter at breast height) of windfalls the colonization of stems by Ips typographus was positively affected, H. palliatus, I. fuscum, Polygraphus poligraphus (L.) responded the other way round. |
Development of a scientific study for accessing the criteria under Commission Regulation (EC) 2073/2005 on traditional Slovak sheep cheese "bryndza"Lenka Cabanová, Oµga ©kuntová, Daniela Matisová, Monika PipováCzech J. Food Sci., 2011, 29(1):31-34 | DOI: 10.17221/151/2010-CJFS A scientific shelf-life study for Listeria monocytogenes in the typical Slovak cheese "bryndza" was performed in accordance with the requirements of the Commission Regulation (EC) 2073/2005. Based on the previous positive findings of L. monocytogenes in the final products, the producer decided to perform laboratory tests, the results of which would allow him a different evaluation of these positive results. Both the physico-chemical (pH, aw) and microbiological examinations of "bryndza" cheese stored at 5.8-6.2°C were performed every two days till the end of the product shelf-life (7 days). Microbiological analyses were performed after artificial contamination of the final product with a mixture of three L. monocytogenes strains. The growth potential of L. monocytogenes was calculated as the difference in the counts of this bacterium between the last day and the first day of the test. The Slovak traditional "bryndza" cheese has been found not to support the growth of L. monocytogenes. Thus, the counts of L. monocytogenes must not exceed 50 CFU/g at the beginning and 20 CFU/g at the end of the product shelf-life in order to ensure its safety for the consumer. |
